RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CCR8P51685 355 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 CDC16Q13042 620 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 CASP8Q14790 479 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PCBP2Q15366 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PDK4Q16654 411 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 CATSPEREQ5SY80 951 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PWWP2BQ6NUJ5 590 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 TMPRSS11BQ86T26 416 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 ZFAND4Q86XD8 727 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 GPR135Q8IZ08 494 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PTGR2Q8N8N7 351 aaPredicted RBP13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 OR4K1Q8NGD4 311 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 ZBTB9Q96C00 473 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PHF21BQ96EK2 531 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 SPRTNQ9H040 489 aaPredicted RBP13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 PELI2Q9HAT8 420 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 IRAK4Q9NWZ3 460 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 OPTCQ9UBM4 332 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 ACSL6Q9UKU0 697 aa13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 TNPO3Q9Y5L0 923 aaKnown RBP13.85□□□□□ -0.19
DNMT3A-208ENST00000466601 LRRC14BA6NHZ5 514 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 E7EQ34 232 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 H3BMH7 237 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 K7EPI3 171 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 STX16O14662 325 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 CLGNO14967 610 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 TLX3O43711 291 aaPredicted RBP13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 SCRG1O75711 98 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 OR2B3O76000 313 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 STK17BO94768 372 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 KIAA0754O94854 1291 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 GRK3P35626 688 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 VSX2P58304 361 aaPredicted RBP13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 CCDC153Q494R4 210 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 PRAMEF17Q5VTA0 474 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 FRMPD2BQ6IN97 320 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 NXPE4Q6UWF7 544 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 SLCO4C1Q6ZQN7 724 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 PLD3Q8IV08 490 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 BANPQ8N9N5 519 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 RNF31Q96EP0 1072 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 OR2A5Q96R48 311 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 SMC6Q96SB8 1091 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 ULBP3Q9BZM4 244 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 SPRY4Q9C004 299 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 MKS1Q9NXB0 559 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 EMCNQ9ULC0 261 aa13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 TMEM184BQ9Y519 407 aaPredicted RBP13.84□□□□□ -0.19
DNMT3A-208ENST00000466601 LOC105369274A0A096LPK9 316 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 LOC102723532A0A0G2JNH3 316 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 FEZF1A0PJY2 475 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 TMEM8BA6NDV4 472 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 A8MT66 165 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 H0YGG7 62 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 STMND1H3BQB6 276 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ZSCAN9O15535 394 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 H2AFYO75367 372 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 SIX3O95343 332 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 PROCP04070 461 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 NTRK1P04629 796 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 C1GALT1C1LP0DN25 315 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ATP5F1P24539 256 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 EEF1DP29692 281 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 PCBP4P57723 403 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ARF3P61204 181 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 RPS15AP62244 130 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 MEF2AQ02078 507 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 TCTE1Q5JU00 501 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 WASHC2DQ5SRD0 308 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 METTL2BQ6P1Q9 378 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 OR4N4Q8N0Y3 316 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 TEX9Q8N6V9 391 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF655Q8N720 491 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 SNIP1Q8TAD8 396 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ZCCHC14Q8WYQ9 949 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 APOPT1Q96IL0 206 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 RUFY1Q96T51 708 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 AIF1LQ9BQI0 150 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC7A5P2Q9GIP4 190 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 C12orf65Q9H3J6 166 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 SYNPO2LQ9H987 977 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 SENP1Q9P0U3 644 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 ANGPTL3Q9Y5C1 460 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 PCDHB3Q9Y5E6 796 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 AP1M2Q9Y6Q5 423 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 HEATR5BQ9P2D3 2071 aa13.83□□□□□ -0.2
DNMT3A-208ENST00000466601 KCNE1BA0A087WTH5 132 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 TRBC2A0A5B9 178 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 E2F3O00716 465 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF749O43361 778 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms