RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FBXO6Q9NRD1 293 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-206ENST00000466532 NSG1A0A0A6YYJ2 146 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 MAGEB16A2A368 324 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 SDR42E2A6NKP2 422 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 IDSB3KWA1 339 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 GOLGA8MH3BSY2 632 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 CLDN1O95832 211 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 SLC16A8O95907 504 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 COX6A1P12074 109 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 MLNP12872 115 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 EZRP15311 586 aaKnown RBP18.22■□□□□ 0.51
COL9A3-206ENST00000466532 EMP2P54851 167 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 CTBP1Q13363 440 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 NDUFAF7Q7L592 441 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 SPNS2Q8IVW8 549 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 KBTBD2Q8IY47 623 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 FBXO15Q8NCQ5 510 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-206ENST00000466532 RERGQ96A58 199 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-206ENST00000466532 MMABQ96EY8 250 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-206ENST00000466532 OR2A5Q96R48 311 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 LMF1Q96S06 567 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 XAB2Q9HCS7 855 aaKnown RBP18.22■□□□□ 0.51
COL9A3-206ENST00000466532 PCYOX1Q9UHG3 505 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 MED16Q9Y2X0 877 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 POLEQ07864 2286 aa18.22■□□□□ 0.51
COL9A3-206ENST00000466532 E7ENX8 843 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 SMAPO00193 183 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 ANXA5P08758 320 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 MPC1LP0DKB6 136 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 CXCR2P25025 360 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 COL8A1P27658 744 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 ABATP80404 500 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 TAP2Q03519 686 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 EEF1A2Q05639 463 aaKnown RBP18.21■□□□□ 0.51
COL9A3-206ENST00000466532 GARNL3Q5VVW2 1013 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 CRYBG3Q68DQ2 2970 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF549Q6P9A3 640 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 ADCK2Q7Z695 626 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 LURAP1LQ8IV03 231 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 LRRC8AQ8IWT6 810 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 AMER3Q8N944 861 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 MCUQ8NE86 351 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 CATSPER1Q8NEC5 780 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 FAR1Q8WVX9 515 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 ASB11Q8WXH4 323 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 KCNJ9Q92806 393 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 MAGOHBQ96A72 148 aaKnown RBP18.21■□□□□ 0.51
COL9A3-206ENST00000466532 SERPINB12Q96P63 405 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 C14orf105Q9NVL8 296 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 KLHL42Q9P2K6 505 aa18.21■□□□□ 0.51
COL9A3-206ENST00000466532 CENPEQ02224 2701 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 A0A0A6YYC8 382 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 ZCWPW2A0A1B0GU75 182 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 I3L1I5 382 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 E2F3O00716 465 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 HAT1O14929 419 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 KIF5CO60282 957 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 HEXBP07686 556 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 PRR35P0CG20 571 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 ENO3P13929 434 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 SLC26A3P40879 764 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 SLC1A2P43004 574 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 CCZ1BP86790 482 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 CCZ1P86791 482 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 THEMIS2Q5TEJ8 643 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 FAAH2Q6GMR7 532 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 BRIX1Q8TDN6 353 aaKnown RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 MS4A14Q96JA4 679 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 GPR21Q99679 349 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 DRC3Q9H069 523 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 MKKSQ9NPJ1 570 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 C20orf96Q9NUD7 363 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-206ENST00000466532 PTGFRNQ9P2B2 879 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 PPP2R2CQ9Y2T4 447 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 DHRS7Q9Y394 339 aa18.2■□□□□ 0.5
COL9A3-206ENST00000466532 IGHV1-45A0A0A0MS14 117 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 GFYI3L273 518 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 TXNDC9O14530 226 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 P2RX6O15547 441 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 FOXS1O43638 330 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 ZBTB14O43829 449 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 EDN3P14138 238 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 FDXRP22570 491 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 ARG2P78540 354 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 RELAQ04206 551 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 SYT16Q17RD7 645 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 ZNF787Q6DD87 383 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 CCDC137Q6PK04 289 aaKnown RBP18.19■□□□□ 0.5
COL9A3-206ENST00000466532 FAM180AQ6UWF9 173 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 CYHR1Q6ZMK1 362 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 PLD3Q8IV08 490 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 LRRC56Q8IYG6 542 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-206ENST00000466532 CPNE9Q8IYJ1 553 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 ARHGEF39Q8N4T4 335 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 OR1N1Q8NGS0 311 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 CD200R1Q8TD46 325 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 PSMF1Q92530 271 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms