RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CTIFO43310 598 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 HCRTR1O43613 425 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KLK8O60259 260 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SMIM24O75264 130 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 GLRA3O75311 464 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KIAA0754O94854 1291 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TIAF1O95411 115 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CDH1P12830 882 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 GDF5P43026 501 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 HSPA7P48741 367 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ATP1A2P50993 1020 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 RPS15AP62244 130 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CSNK1G2P78368 415 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 PFKFB4Q16877 469 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 YOD1Q5VVQ6 348 aaPredicted RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 METTL2BQ6P1Q9 378 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CROCCP2Q86T23 111 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ZFAND4Q86XD8 727 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 DTX1Q86Y01 620 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NLGN4XQ8N0W4 816 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TBC1D19Q8N5T2 526 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ESX1Q8N693 406 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NLGN4YQ8NFZ3 816 aaPredicted RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 LRFN5Q96NI6 719 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 PRAP1Q96NZ9 151 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SELENOSQ9BQE4 189 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SARGQ9BW04 601 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SLC7A5P2Q9GIP4 190 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ACTR5Q9H9F9 607 aaPredicted RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 PELI2Q9HAT8 420 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 OPTCQ9UBM4 332 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 DCDC2Q9UHG0 476 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SRPK3Q9UPE1 567 aa11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TNPO3Q9Y5L0 923 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ANKRD11Q6UB99 2663 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KCNE1BA0A087WTH5 132 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 A0A1W2PPM1 405 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 FITM1A5D6W6 292 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 STX16-NPEPL1H3BU86 382 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 K7EPI3 171 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TK2O00142 265 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TXNDC9O14530 226 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 STX16O14662 325 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 HAT1O14929 419 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NRP2O60462 931 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CCNT2O60583 730 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 RAD1O60671 282 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ZNF28P17035 718 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KRT4P19013 534 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TAC1P20366 129 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 EIF2S3P41091 472 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CCT5P48643 541 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ARSFP54793 590 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ZNF844Q08AG5 666 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 GRM7Q14831 915 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SETDB1Q15047 1291 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 PDK4Q16654 411 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 C18orf21Q32NC0 220 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KRT71Q3SY84 523 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 BEND6Q5SZJ8 279 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 FRMPD2BQ6IN97 320 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 FBXO42Q6P3S6 717 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NXPE4Q6UWF7 544 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 C6orf15Q6UXA7 325 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 LRIG3Q6UXM1 1119 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SH2D5Q6ZV89 423 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TMPRSS11BQ86T26 416 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TTC29Q8NA56 475 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 OR4K1Q8NGD4 311 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 RERGQ96A58 199 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 OR2A5Q96R48 311 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 AIF1LQ9BQI0 150 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NDC1Q9BTX1 674 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SPRTNQ9H040 489 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ARGLU1Q9NWB6 273 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CPSF2Q9P2I0 782 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 SH2B3Q9UQQ2 575 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 RAXQ9Y2V3 346 aa11.16□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ACACAQ13085 2346 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 AHCTF1Q8WYP5 2266 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 A0A087WV48 116 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TRBC2A0A5B9 178 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 H0YGG7 62 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 TAF4O00268 1085 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 COPEO14579 308 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CLGNO14967 610 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 ZNF749O43361 778 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KATNA1O75449 491 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 NTRK1P04629 796 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 KLK3P07288 261 aaPredicted RBP11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
TRAF3IP1-204ENST00000462122 EPB42P16452 691 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms