RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MAIP1Q8WWC4 291 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 CABS1Q96KC9 395 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 ZNF354BQ96LW1 612 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 RAB11FIP5Q9BXF6 653 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 KLHL1Q9NR64 748 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 TTC7AQ9ULT0 858 aaPredicted RBP16.34■□□□□ 0.21
TOP3A-202ENST00000461127 LOC102723996A0A087X1L8 192 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 ASNA1O43681 348 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MED26O95402 600 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 CD46P15529 392 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 KLK2P20151 261 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 IST1P53990 364 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 CSE1LP55060 971 aaKnown RBP16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MSLNQ13421 630 aaPredicted RBP16.33■□□□□ 0.2
TOP3A-202ENST00000461127 PCOLCEQ15113 449 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 TAZQ16635 292 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 CES4AQ5XG92 561 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 FRMPD2BQ6IN97 320 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 DOLPP1Q86YN1 238 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 PIANPQ8IYJ0 282 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 TAB3Q8N5C8 712 aaPredicted RBP16.33■□□□□ 0.2
TOP3A-202ENST00000461127 TMEM178AQ8NBL3 297 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MNS1Q8NEH6 495 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 CFAP61Q8NHU2 1237 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 HAUS1Q96CS2 278 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MVB12AQ96EY5 273 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 PPP1R2P1Q96PQ5 205 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 DMRTA2Q96SC8 542 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 FOXC2Q99958 501 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 GORASP1Q9BQQ3 440 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MENTQ9BUN1 341 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 MKKSQ9NPJ1 570 aaPredicted RBP16.33■□□□□ 0.2
TOP3A-202ENST00000461127 NLE1Q9NVX2 485 aaPredicted RBP16.33■□□□□ 0.2
TOP3A-202ENST00000461127 EFR3BQ9Y2G0 817 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 PRSS21Q9Y6M0 314 aa16.33■□□□□ 0.2
TOP3A-202ENST00000461127 GOLGA6L10A0A0M3HER8 536 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 TMEM200CA6NKL6 621 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 ANXA5P08758 320 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 FOLH1Q04609 750 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 TTC23LQ6PF05 361 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 C3P1Q6ZMU1 363 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 SLC22A15Q8IZD6 547 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 RAB42Q8N4Z0 105 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 CEP112Q8N8E3 955 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 LMNTD1Q8N9Z9 388 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 METTL21AQ8WXB1 218 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 CDKN2AIPNLQ96HQ2 116 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 IL17FQ96PD4 163 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 TBL1YQ9BQ87 522 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 UTP23Q9BRU9 249 aaKnown RBP16.32■□□□□ 0.2
TOP3A-202ENST00000461127 TGIF2Q9GZN2 237 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 CXXC4Q9H2H0 198 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 SLC24A3Q9HC58 644 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
TOP3A-202ENST00000461127 LOC105369274A0A096LPK9 316 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 LOC102723532A0A0G2JNH3 316 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 ASPDHA6ND91 283 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 H7C0C1 242 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 STK10O94804 968 aaKnown RBP16.31■□□□□ 0.2
TOP3A-202ENST00000461127 IGFBP2P18065 325 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 PSMB4P28070 264 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 ATP5OP48047 213 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 EMP3P54852 163 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 HSPA14Q0VDF9 509 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 TUBA3CQ13748 450 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 ACER2Q5QJU3 275 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 TUBA3EQ6PEY2 450 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 UNC5DQ6UXZ4 953 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 BBS12Q6ZW61 710 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 OR4N4Q8N0Y3 316 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 BEST3Q8N1M1 668 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 HORMAD2Q8N7B1 307 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 ASB5Q8WWX0 329 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 IMMP1LQ96LU5 166 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 C10orf90Q96M02 699 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 FRMD6Q96NE9 622 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 L2HGDHQ9H9P8 463 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 ARNT2Q9HBZ2 717 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 STOX2Q9P2F5 926 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-202ENST00000461127 KCNN3Q9UGI6 736 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 KLK4Q9Y5K2 254 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 SCN2AQ99250 2005 aa16.31■□□□□ 0.2
TOP3A-202ENST00000461127 FFAR3O14843 346 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 GPR42O15529 346 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 ZWINTO95229 277 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 C8orf89P0DMQ9 161 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 RBL1P28749 1068 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 OR1C1Q15619 314 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 TMEM205Q6UW68 189 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 RNF44Q7L0R7 432 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 MDS2Q8NDY4 140 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 STYXQ8WUJ0 223 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 ASZ1Q8WWH4 475 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 NINJ1Q92982 152 aa16.3■□□□□ 0.2
TOP3A-202ENST00000461127 MMABQ96EY8 250 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms