RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ADAMTSL2Q86TH1 951 aa16.58■□□□□ 0.24
USP39-208ENST00000455732 ENDOVQ8N8Q3 282 aaKnown RBP16.58■□□□□ 0.24
USP39-208ENST00000455732 OR56A3Q8NH54 315 aa16.58■□□□□ 0.24
USP39-208ENST00000455732 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.24
USP39-208ENST00000455732 CAB39LQ9H9S4 337 aa16.58■□□□□ 0.24
USP39-208ENST00000455732 NINJ2Q9NZG7 142 aa16.58■□□□□ 0.24
USP39-208ENST00000455732 DHCR7Q9UBM7 475 aaKnown RBP16.58■□□□□ 0.24
USP39-208ENST00000455732 TNRC6AQ8NDV7 1962 aaKnown RBP16.57■□□□□ 0.24
USP39-208ENST00000455732 DSCR3O14972 297 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 SLC28A2O43868 658 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 STMN1P16949 149 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 PHBP35232 272 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 VSX2P58304 361 aaPredicted RBP16.57■□□□□ 0.24
USP39-208ENST00000455732 NAE1Q13564 534 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 EFTUD2Q15029 972 aaKnown RBP eCLIP16.57■□□□□ 0.243e-8■■□□□ 13.7
USP39-208ENST00000455732 ZXDCQ2QGD7 858 aaPredicted RBP16.57■□□□□ 0.24
USP39-208ENST00000455732 PRTGQ2VWP7 1150 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 FAM214AQ32MH5 1076 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 NKAIN1Q4KMZ8 207 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 WASHC2DQ5SRD0 308 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 C1orf189Q5VU69 101 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 CAPN13Q6MZZ7 669 aaPredicted RBP16.57■□□□□ 0.24
USP39-208ENST00000455732 PRICKLE2Q7Z3G6 844 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 ADAMTS17Q8TE56 1095 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 IFT81Q8WYA0 676 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 OR2A5Q96R48 311 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 CYTH2Q99418 400 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 HAUS8Q9BT25 410 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 ATG10Q9H0Y0 220 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 CUTCQ9NTM9 273 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 TMEM184CQ9NVA4 438 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 CUEDC1Q9NWM3 386 aaPredicted RBP16.57■□□□□ 0.24
USP39-208ENST00000455732 TCFL5Q9UL49 500 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 OARD1Q9Y530 152 aa16.57■□□□□ 0.24
USP39-208ENST00000455732 LOC105369274A0A096LPK9 316 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 LOC102723532A0A0G2JNH3 316 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 NPEPPSL1A6NEC2 478 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 H0YGG7 62 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 CDC7O00311 574 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 PHGDHO43175 533 aaKnown RBP16.56■□□□□ 0.24
USP39-208ENST00000455732 CD63P08962 238 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 ITGAXP20702 1163 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 RAB10P61026 200 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 ARF3P61204 181 aaPredicted RBP16.56■□□□□ 0.24
USP39-208ENST00000455732 NFKB2Q00653 900 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 C17orf64Q86WR6 236 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
USP39-208ENST00000455732 OR4N4Q8N0Y3 316 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 FKBP10Q96AY3 582 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 ABHD17AQ96GS6 310 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 UBXN10Q96LJ8 280 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 CDC42EP4Q9H3Q1 356 aaKnown RBP16.56■□□□□ 0.24
USP39-208ENST00000455732 ACSS3Q9H6R3 686 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 SYNPO2LQ9H987 977 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 ABCF3Q9NUQ8 709 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 CTNNAL1Q9UBT7 734 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 PADI2Q9Y2J8 665 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 PCSK5Q92824 1860 aa16.56■□□□□ 0.24
USP39-208ENST00000455732 NUP210LQ5VU65 1888 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 HYKKA2RU49 373 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 H7BY64 318 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 HAT1O14929 419 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 SUV39H1O43463 412 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 FAM155BO75949 473 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 GUCA1CO95843 209 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 HNMTP50135 292 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 PMS2P54278 862 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
USP39-208ENST00000455732 FAM69BQ5VUD6 431 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 MRPL14Q6P1L8 145 aaKnown RBP16.55■□□□□ 0.24
USP39-208ENST00000455732 TTLL10Q6ZVT0 673 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 ADCK2Q7Z695 626 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 ABHD11Q8NFV4 315 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 C9orf43Q8TAL5 461 aaPredicted RBP16.55■□□□□ 0.24
USP39-208ENST00000455732 THAP4Q8WY91 577 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 THAP11Q96EK4 314 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 PRAP1Q96NZ9 151 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 SLC22A11Q9NSA0 550 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 IFT80Q9P2H3 777 aaPredicted RBP16.55■□□□□ 0.24
USP39-208ENST00000455732 SH2B3Q9UQQ2 575 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 MAN2B2Q9Y2E5 1009 aa16.55■□□□□ 0.24
USP39-208ENST00000455732 HEMK1Q9Y5R4 338 aaPredicted RBP16.55■□□□□ 0.24
USP39-208ENST00000455732 KCNE1BA0A087WTH5 132 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 TXNDC9O14530 226 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 KLF7O75840 302 aaPredicted RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 ALBP02768 609 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 ANXA5P08758 320 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CCDC166P0CW27 439 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 PIM1P11309 404 aaPredicted RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 CD1DP15813 335 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 NPPBP16860 134 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CRABP2P29373 138 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 SLC26A3P40879 764 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CSRP3P50461 194 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 RPS15AP62244 130 aaKnown RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 CSNK1G2P78368 415 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 SLMAPQ14BN4 828 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 MUM1Q2TAK8 710 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms