RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 HNF4AP41235 474 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 CCR8P51685 355 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 CSNK1G2P78368 415 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 ILKQ13418 452 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 GRHL2Q6ISB3 625 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 GLRX5Q86SX6 157 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 PAQR7Q86WK9 346 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 KIRREL3Q8IZU9 778 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 CHCHD4Q8N4Q1 142 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 ZNF781Q8N8C0 355 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 ZUFSPQ96AP4 578 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 PRAP1Q96NZ9 151 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 TGM7Q96PF1 710 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 PLCD4Q9BRC7 762 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 NUDT22Q9BRQ3 303 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 SEMA6CQ9H3T2 930 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 PDP2Q9P2J9 529 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 ZDHHC2Q9UIJ5 367 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 SNX7Q9UNH6 387 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 OR2A25A4D2G3 310 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 GFRA3O60609 400 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 EDF1O60869 148 aaKnown RBP15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 MAGP20916 626 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 GNGT1P63211 74 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 REEP5Q00765 189 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 LAPTM5Q13571 262 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 SH2D4BQ5SQS7 431 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 TMEM71Q6P5X7 295 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 FAM47EQ6ZV65 393 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 USP53Q70EK8 1073 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 NETO1Q8TDF5 533 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 TRAPPC9Q96Q05 1148 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 MAP3K3Q99759 626 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 SARGQ9BW04 601 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 SLC29A3Q9BZD2 475 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 PITHD1Q9GZP4 211 aaPredicted RBP15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 SPNS1Q9H2V7 528 aa15.94■□□□□ 0.14
CCDC90B-202ENST00000455220 H0YIV9 168 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 AZIN1O14977 448 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 KIF1CO43896 1103 aaKnown RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 HGFP14210 728 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 HOXB3P14651 431 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 CDH3P22223 829 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 ARL1P40616 181 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 PPM1FP49593 454 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 RPL14P50914 215 aaKnown RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 FOXA1P55317 472 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 RELAQ04206 551 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 SLBPQ14493 270 aaKnown RBP eCLIP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 PAGE2BQ5JRK9 111 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 KANK2Q63ZY3 851 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 FCRL6Q6DN72 434 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 FIGLAQ6QHK4 219 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 FAM92BQ6ZTR7 304 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 TMPRSS9Q7Z410 1059 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 PRSS42Q7Z5A4 293 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 CRLF3Q8IUI8 442 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 HOMEZQ8IX15 550 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 CLYBLQ8N0X4 340 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 CDYL2Q8N8U2 506 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 OR4D9Q8NGE8 314 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 WDR48Q8TAF3 677 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 AIF1LQ9BQI0 150 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 CHRNA10Q9GZZ6 450 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 NT5DC2Q9H857 520 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 TMEM9Q9P0T7 183 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 ATXN7L1Q9ULK2 861 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 KLHL20Q9Y2M5 609 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 TRAF6Q9Y4K3 522 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 PCDHGA1Q9Y5H4 931 aa15.93■□□□□ 0.14
CCDC90B-202ENST00000455220 TM4SF5O14894 197 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 TOX3O15405 576 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 NRP2O60462 931 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 SHOX2O60902 331 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 CAPN1P07384 714 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 UROSP10746 265 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 PVRP15151 417 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 ST6GAL1P15907 406 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 CXCR2P25025 360 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 ZIC1Q15915 447 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 CPSF6Q16630 551 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 UGT3A2Q3SY77 523 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 ZNF574Q6ZN55 896 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 MYLK4Q86YV6 388 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 LAS2Q8IYD9 372 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 KRT78Q8N1N4 520 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 C19orf47Q8N9M1 422 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 PIWIL2Q8TC59 973 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 CHMP6Q96FZ7 201 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 PRR11Q96HE9 360 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 KCNA7Q96RP8 456 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 GFM1Q96RP9 751 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 PNPOQ9NVS9 261 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 TOR4AQ9NXH8 423 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 TSC22D4Q9Y3Q8 395 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 CEP250Q9BV73 2442 aa15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 COL27A1Q8IZC6 1860 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-202ENST00000455220 DMXL1Q9Y485 3027 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms