RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 INTS10Q9NVR2 710 aaKnown RBP26.9■■□□□ 1.9
CBX4-202ENST00000448310 PCYOX1Q9UHG3 505 aa26.9■■□□□ 1.9
CBX4-202ENST00000448310 CDC14AQ9UNH5 594 aa26.9■■□□□ 1.9
CBX4-202ENST00000448310 MED16Q9Y2X0 877 aa26.9■■□□□ 1.9
CBX4-202ENST00000448310 CTAGE9A4FU28 777 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 IDSB3KWA1 339 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 GOLGA8MH3BSY2 632 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 PHF2O75151 1096 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 SYF2O95926 243 aaKnown RBP26.89■■□□□ 1.9
CBX4-202ENST00000448310 DCTP40126 519 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 EMP3P54852 163 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 ZNF549Q6P9A3 640 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 PLD3Q8IV08 490 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 AMER2Q8N7J2 671 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 AMER3Q8N944 861 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 FAR1Q8WVX9 515 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 LMF1Q96S06 567 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 PTGFRNQ9P2B2 879 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 VPS9D1Q9Y2B5 631 aa26.89■■□□□ 1.9
CBX4-202ENST00000448310 CPAMD8Q8IZJ3 1885 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 FAM237BA0A1B0GVD1 139 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 E7ENX8 843 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 SMAPO00193 183 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 P2RX6O15547 441 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 CELA2AP08217 269 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 TAP2Q03519 686 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 THOC5Q13769 683 aaKnown RBP26.88■■□□□ 1.89
CBX4-202ENST00000448310 SYT16Q17RD7 645 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 TTLL9Q3SXZ7 439 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 NDUFAF7Q7L592 441 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 ADCK2Q7Z695 626 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 BRIX1Q8TDN6 353 aaKnown RBP26.88■■□□□ 1.89
CBX4-202ENST00000448310 PSMF1Q92530 271 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 MVB12AQ96EY5 273 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 PLA2G3Q9NZ20 509 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 OSGIN2Q9Y236 505 aa26.88■■□□□ 1.89
CBX4-202ENST00000448310 CELSR2Q9HCU4 2923 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 A0A0A6YYC8 382 aaPredicted RBP26.87■■□□□ 1.89
CBX4-202ENST00000448310 I3L1I5 382 aaPredicted RBP26.87■■□□□ 1.89
CBX4-202ENST00000448310 HAT1O14929 419 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 PRPF4O43172 522 aaKnown RBP eCLIP26.87■■□□□ 1.899e-7■■■■□ 22.3
CBX4-202ENST00000448310 FOXS1O43638 330 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 CCNDBP1O95273 360 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 STATHP02808 62 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 PRR35P0CG20 571 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 CXCR2P25025 360 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 HSD17B2P37059 387 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 SLC26A3P40879 764 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 SNRPNP63162 240 aaKnown RBP26.87■■□□□ 1.89
CBX4-202ENST00000448310 NEK10Q6ZWH5 1172 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 ARHGEF39Q8N4T4 335 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 SIRT6Q8N6T7 355 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 OR1N1Q8NGS0 311 aa26.87■■□□□ 1.89
CBX4-202ENST00000448310 RERGQ96A58 199 aaPredicted RBP26.87■■□□□ 1.89
CBX4-202ENST00000448310 MYO9AB2RTY4 2548 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 ZCWPW2A0A1B0GU75 182 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 SDR42E2A6NKP2 422 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 ZNF839A8K0R7 811 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 KIF5CO60282 957 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 HEXBP07686 556 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 ANXA5P08758 320 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 EDN3P14138 238 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 EZRP15311 586 aaKnown RBP26.86■■□□□ 1.89
CBX4-202ENST00000448310 SLC1A2P43004 574 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 ARG2P78540 354 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 FAM180AQ6UWF9 173 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 ASB11Q8WXH4 323 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 SERPINB12Q96P63 405 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 CCDC68Q9H2F9 335 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 C14orf105Q9NVL8 296 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 SCN3AQ9NY46 2000 aa26.86■■□□□ 1.89
CBX4-202ENST00000448310 UTP6Q9NYH9 597 aaKnown RBP26.86■■□□□ 1.89
CBX4-202ENST00000448310 MRPS2Q9Y399 296 aaKnown RBP26.86■■□□□ 1.89
CBX4-202ENST00000448310 IGHV1-45A0A0A0MS14 117 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 LRRTM2O43300 516 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 F10P00742 488 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 SOX11P35716 441 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 EFNA3P52797 238 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 MAT1AQ00266 395 aaKnown RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 THEMIS2Q5TEJ8 643 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 GARNL3Q5VVW2 1013 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 ARMC3Q5W041 872 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 CYHR1Q6ZMK1 362 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 ZC3H7AQ8IWR0 971 aaKnown RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 LRRC56Q8IYG6 542 aaPredicted RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 AGGF1Q8N302 714 aaeCLIP26.85■■□□□ 1.89
CBX4-202ENST00000448310 FBXO15Q8NCQ5 510 aaPredicted RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 MAGOHBQ96A72 148 aaKnown RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 MS4A14Q96JA4 679 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 MAGEB10Q96LZ2 347 aaPredicted RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 GPR21Q99679 349 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 DRC3Q9H069 523 aa26.85■■□□□ 1.89
CBX4-202ENST00000448310 MKKSQ9NPJ1 570 aaPredicted RBP26.85■■□□□ 1.89
CBX4-202ENST00000448310 SERPINA7P05543 415 aa26.84■■□□□ 1.89
CBX4-202ENST00000448310 MPC1LP0DKB6 136 aa26.84■■□□□ 1.89
CBX4-202ENST00000448310 MLNP12872 115 aa26.84■■□□□ 1.89
CBX4-202ENST00000448310 MPP1Q00013 466 aa26.84■■□□□ 1.89
CBX4-202ENST00000448310 PIWIL4Q7Z3Z4 852 aaKnown RBP26.84■■□□□ 1.89
CBX4-202ENST00000448310 CPNE9Q8IYJ1 553 aa26.84■■□□□ 1.89
CBX4-202ENST00000448310 KCNJ9Q92806 393 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms