RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PSMD6Q15008 389 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 RBBP7Q16576 425 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 GOLGA7BQ2TAP0 167 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 GXYLT1Q4G148 440 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 TMTC4Q5T4D3 741 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 GPRC6AQ5T6X5 926 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 DENND2CQ68D51 928 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 CYB5R2Q6BCY4 276 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 RETSATQ6NUM9 610 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 NEK10Q6ZWH5 1172 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 GALNTL5Q7Z4T8 443 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 GALNT13Q8IUC8 556 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 LILRA3Q8N6C8 439 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-205ENST00000447267 ATP6V0D2Q8N8Y2 350 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 ANKRD52Q8NB46 1076 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 REPS1Q96D71 796 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 SERPINB11Q96P15 392 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 HERPUD2Q9BSE4 406 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 RAB34Q9BZG1 259 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 MRPL44Q9H9J2 332 aaKnown RBP4.66□□□□□ -1.66
SDCBP-205ENST00000447267 UCK1Q9HA47 277 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 SLC22A11Q9NSA0 550 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 PNPLA3Q9NST1 481 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 SPTLC3Q9NUV7 552 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 MPP6Q9NZW5 540 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 COX16Q9P0S2 106 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 EIF3LQ9Y262 564 aaKnown RBP4.66□□□□□ -1.66
SDCBP-205ENST00000447267 FAM215AQ9Y5M1 114 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 ALG6Q9Y672 507 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 CR1P17927 2039 aa4.66□□□□□ -1.66
SDCBP-205ENST00000447267 C2orf81A6NN90 581 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 GOLGA6L6A8MZA4 724 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 NPIPA2E9PIF3 369 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 NPIPA3F8WFD2 350 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 XPO1O14980 1071 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 MAPK13O15264 365 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 VEGFDO43915 354 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 MFAP3LO75121 409 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 GCNT3O95395 438 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 GSRP00390 522 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ELFN1P0C7U0 828 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ITGAMP11215 1152 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 PAX1P15863 534 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ZNF24P17028 368 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 XRCC1P18887 633 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 BMP5P22003 454 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 CD40P25942 277 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 IDUAP35475 653 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 SNRPD1P62314 119 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 CEBPZQ03701 1054 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 CYP24A1Q07973 514 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 TRIM25Q14258 630 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ABHD17BQ5VST6 288 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 FCRLBQ6BAA4 426 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 RAET1GQ6H3X3 334 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ERAP2Q6P179 960 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ZNF662Q6ZS27 426 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 PLEKHM3Q6ZWE6 761 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 PHLDB2Q86SQ0 1253 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 SEMA6DQ8NFY4 1073 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ZG16BQ96DA0 208 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 PGAP3Q96FM1 320 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 HIST1H2AHQ96KK5 128 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 HIST1H2AJQ99878 128 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 MIS12Q9H081 205 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 RWDD1Q9H446 243 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 YY1AP1Q9H869 796 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 EML4Q9HC35 981 aaKnown RBP4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ZKSCAN5Q9Y2L8 839 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 ATP8A1Q9Y2Q0 1164 aa4.65□□□□□ -1.67
SDCBP-205ENST00000447267 SPTBP11277 2137 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 A0A096LNT2 108 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CENPVL1A0A0U1RR11 272 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 OR52A4PA6NMU1 304 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 A8MUI8 341 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 E7EQ34 232 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 QSOX1O00391 747 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CASKO14936 926 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 KIAA0391O15091 583 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 HS6ST1O60243 411 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TMEM127O75204 238 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 BMP10O95393 424 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ZBTB11O95625 1053 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 HPP00738 406 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ATP1A1P05023 1023 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 IGHV4-31P0DP07 118 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TRIM21P19474 475 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TNFAIP3P21580 790 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ACVR2AP27037 513 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 PRPHP41219 470 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 LMAN1P49257 510 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ASCL1P50553 236 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TOB1P50616 345 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 NEK4P51957 841 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TMPRSS15P98073 1019 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms