RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PCSK5Q92824 1860 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 ATRXP46100 2492 aa14.18□□□□□ -0.14
HDAC4-204ENST00000446876 HYKKA2RU49 373 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 HMX2A2RU54 273 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 FITM1A5D6W6 292 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 NCF1BA6NI72 391 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 NCF1CA8MVU1 366 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 C9J4A7 227 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 DSCR3O14972 297 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 P2RX6O15547 441 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 SRPX2O60687 465 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 ITGB2P05107 769 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 RAB40ALP0C0E4 278 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 NCF1P14598 390 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 EZRP15311 586 aaKnown RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CD1DP15813 335 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 DCDP81605 110 aaKnown RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 ILF2Q12905 390 aaKnown RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 DLG1Q12959 904 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CSHL1Q14406 222 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 OR4D1Q15615 310 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 HKDC1Q2TB90 917 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 NKAIN1Q4KMZ8 207 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 MROH9Q5TGP6 573 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 MLIPQ5VWP3 458 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CAPN13Q6MZZ7 669 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 BORAQ6PGQ7 559 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 LCTLQ6UWM7 567 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CEP128Q6ZU80 1094 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 FRA10AC1Q70Z53 315 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 ADAMTSL2Q86TH1 951 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 C17orf64Q86WR6 236 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CSNK1A1LQ8N752 337 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 PTERQ96BW5 349 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 C10orf90Q96M02 699 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 OR2A5Q96R48 311 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 CYTH2Q99418 400 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 EGFL8Q99944 293 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 DPH2Q9BQC3 489 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 ARHGAP9Q9BRR9 750 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 IFT80Q9P2H3 777 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-204ENST00000446876 TCFL5Q9UL49 500 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 OARD1Q9Y530 152 aa14.17□□□□□ -0.14
HDAC4-204ENST00000446876 A0A1B0GX78 115 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 FEZF1A0PJY2 475 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 FAM153BP0C7A2 387 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 SLC35E2BP0CK96 405 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 NPPBP16860 134 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 OR1D4P47884 311 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 ARSFP54793 590 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 SNRPNP63162 240 aaKnown RBP14.16□□□□□ -0.14
HDAC4-204ENST00000446876 CSNK1G2P78368 415 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 IRF9Q00978 393 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 MEF2AQ02078 507 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-204ENST00000446876 PRTGQ2VWP7 1150 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 FAM153CQ494X1 144 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 FBXO48Q5FWF7 155 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 RAPH1Q70E73 1250 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 COX15Q7KZN9 410 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 SYVN1Q86TM6 617 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 IFT20Q8IY31 132 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 ATL1Q8WXF7 558 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 ANKRD7Q92527 254 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 EXT2Q93063 718 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 CABS1Q96KC9 395 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 TSNARE1Q96NA8 513 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 PCBD2Q9H0N5 130 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 TSPYL1Q9H0U9 437 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 L2HGDHQ9H9P8 463 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 TMEM184CQ9NVA4 438 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 GPN3Q9UHW5 284 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-204ENST00000446876 RUVBL1Q9Y265 456 aaKnown RBP14.16□□□□□ -0.14
HDAC4-204ENST00000446876 MAU2Q9Y6X3 613 aa14.16□□□□□ -0.14
HDAC4-204ENST00000446876 C1QL1O75973 258 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 ANXA5P08758 320 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 CCND1P24385 295 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 BCL6P41182 706 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 POLE2P56282 527 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 UGT8Q16880 541 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 CRTC2Q53ET0 693 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-204ENST00000446876 CATSPEREQ5SY80 951 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 TEX35Q5T0J7 233 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 VN1R4Q7Z5H5 301 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 RERGQ96A58 199 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-204ENST00000446876 RHBDF1Q96CC6 855 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 UBXN10Q96LJ8 280 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 CATSPER2Q96P56 530 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 MACROD1Q9BQ69 325 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 HAUS8Q9BT25 410 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 FUT8Q9BYC5 575 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 ENAMQ9NRM1 1142 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 SNX15Q9NRS6 342 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 IGSF5Q9NSI5 407 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 CTSFQ9UBX1 484 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 POLHQ9Y253 713 aa14.15□□□□□ -0.14
HDAC4-204ENST00000446876 MRPS2Q9Y399 296 aaKnown RBP14.15□□□□□ -0.14
HDAC4-204ENST00000446876 PTRH2Q9Y3E5 179 aaKnown RBP14.15□□□□□ -0.14
HDAC4-204ENST00000446876 SCN3AQ9NY46 2000 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms