RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 OR5K1Q8NHB7 308 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 ARRDC3Q96B67 414 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 WDR34Q96EX3 536 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 MED8Q96G25 268 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 MTERF1Q99551 399 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 WRAP53Q9BUR4 548 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 SAMD4AQ9UPU9 718 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 GMEB1Q9Y692 573 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 EDDM13A0A1B0GTR0 161 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 H3BM21 787 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 FPGTO14772 594 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 SCAMP2O15127 329 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 C1orf105O95561 183 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 MYCLP1P12525 358 aaPredicted RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 COX7A2P14406 83 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 PCSK6P29122 969 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 PDHA2P29803 388 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 RAE1P78406 368 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 ELP6Q0PNE2 266 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 HNRNPA1L2Q32P51 320 aaKnown RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 TTC23Q5W5X9 447 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 CPZQ66K79 652 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 CES5AQ6NT32 575 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 SLCO4C1Q6ZQN7 724 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 CPA6Q8N4T0 437 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 OR8D1Q8WZ84 308 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 HERVK_113Q902F9 699 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 NXPE3Q969Y0 559 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 MUS81Q96NY9 551 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 PANX1Q96RD7 426 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 MBOAT4Q96T53 435 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 NPLQ9BXD5 320 aaPredicted RBP13.67□□□□□ -0.22
NCLP1-201ENST00000445357 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
NCLP1-201ENST00000445357 COL4A3Q01955 1670 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 CLIC1O00299 241 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 EPN2O95208 641 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 ETHE1O95571 254 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 TTKP33981 857 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 SHMT2P34897 504 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 DCTP40126 519 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 IST1P53990 364 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 BIRC2Q13490 618 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 VMACQ2NL98 169 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 GAB4Q2WGN9 574 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 ZIK1Q3SY52 487 aaPredicted RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 SPIN4Q56A73 249 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 C9orf64Q5T6V5 341 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 XKR5Q6UX68 686 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 ERI1Q8IV48 349 aaKnown RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 CHPFQ8IZ52 775 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 CHTF18Q8WVB6 975 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 NUS1Q96E22 293 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 LINC00615Q96LM1 132 aaPredicted RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 SIRT5Q9NXA8 310 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
NCLP1-201ENST00000445357 KCNE2Q9Y6J6 123 aa13.66□□□□□ -0.22
NCLP1-201ENST00000445357 MAGEB17A8MXT2 336 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 GNGT2O14610 69 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 KCNK5O95279 499 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 RB1P06400 928 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ENGP17813 658 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 PBLDP30039 288 aaPredicted RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 METAP1P53582 386 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 DPTQ07507 201 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 MESP2Q0VG99 397 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 LAPTM5Q13571 262 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 EIF4HQ15056 248 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 PLCL1Q15111 1095 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 CAPN13Q6MZZ7 669 aaPredicted RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 HIPK1Q86Z02 1210 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ZNF480Q8WV37 535 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 REPS1Q96D71 796 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 HIC2Q96JB3 615 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ZNF514Q96K75 400 aaPredicted RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 SPATA9Q9BWV2 254 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 SGPP1Q9BX95 441 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 SMURF2Q9HAU4 748 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 FAM118AQ9NWS6 357 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 BTNL2Q9UIR0 455 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ATG2AQ2TAZ0 1938 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 PAPLNO95428 1278 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 NFATC1O95644 943 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 LAMP1P11279 417 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 VIPR2P41587 438 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms