RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SLC6A19Q695T7 634 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 JMJD6Q6NYC1 403 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-203ENST00000444440 KIRREL2Q6UWL6 708 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 TMEM207Q6UWW9 146 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 CLEC18BQ6UXF7 455 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 SYT10Q6XYQ8 523 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 PRSS41Q7RTY9 318 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 MAATS1Q7Z4T9 603 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 VN1R4Q7Z5H5 301 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 PRSS58Q8IYP2 241 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 PDIK1LQ8N165 341 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 GALNT16Q8N428 558 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 AMER3Q8N944 861 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 CLEC18CQ8NCF0 446 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 BBOF1Q8ND07 529 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 STT3BQ8TCJ2 826 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 LINGO1Q96FE5 620 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 KRT12Q99456 494 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 MACROD1Q9BQ69 325 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 C17orf62Q9BQA9 187 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 ZNF552Q9H707 407 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-203ENST00000444440 WDR54Q9H977 334 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 ZNF304Q9HCX3 659 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 GPR83Q9NYM4 423 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 ANKMY1Q9P2S6 941 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 FBXL4Q9UKA2 621 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 USP9XQ93008 2570 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-203ENST00000444440 E7ESA3 106 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 H7BY64 318 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 AGPSO00116 658 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 ZBTB14O43829 449 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 TTC4O95801 387 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 ALBP02768 609 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 ZGLP1P0C6A0 271 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 FDXRP22570 491 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 RRADP55042 308 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 KLC1Q07866 573 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 ZNF460Q14592 562 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 HIF1AQ16665 826 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 HECTD2Q5U5R9 776 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 YOD1Q5VVQ6 348 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-203ENST00000444440 GALNT7Q86SF2 657 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 CSNK1A1LQ8N752 337 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 C8orf44Q96CB5 159 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 SNF8Q96H20 258 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 CCDC138Q96M89 665 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 PRAP1Q96NZ9 151 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 ATG10Q9H0Y0 220 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 SMYD2Q9NRG4 433 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 TAS2R13Q9NYV9 303 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 CDC23Q9UJX2 597 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 SNX24Q9Y343 169 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 SVILO95425 2214 aa10.35□□□□□ -0.75
SF3A1-203ENST00000444440 EML6Q6ZMW3 1958 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 IGLV3-12A0A075B6K2 115 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 FEZF1A0PJY2 475 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CTAGE15A4D2H0 777 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 FAM187AA6NFU0 413 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 EFCAB8A8MWE9 144 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 EIF3FO00303 357 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 LCMT2O60294 686 aaKnown RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 TUBB4AP04350 444 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 EZRP15311 586 aaKnown RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 FBLP22087 321 aaKnown RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 ARL4CP56559 192 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CSNK1G2P78368 415 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 MAT1AQ00266 395 aaKnown RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 C2orf54Q08AI8 447 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 MYBPC3Q14896 1274 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 MUM1Q2TAK8 710 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 PLEKHN1Q494U1 663 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 THEMIS2Q5TEJ8 643 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 VWA5B1Q5TIE3 1220 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 PRAMEF13Q5VWM6 474 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 KIAA0408Q6ZU52 694 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 ADCK2Q7Z695 626 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 GPATCH11Q8N954 259 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CLEC1AQ8NC01 280 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 FBXO36Q8NEA4 188 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 OR11G2Q8NGC1 345 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CPT1CQ8TCG5 803 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 COL26A1Q96A83 441 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 PYCR2Q96C36 320 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 LRRC39Q96DD0 335 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 C19orf60Q96EN9 201 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CABS1Q96KC9 395 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 FER1L6-AS2Q96M78 137 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 IP6K3Q96PC2 410 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 OR4K3Q96R72 315 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 MCMBPQ9BTE3 642 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 SPNS1Q9H2V7 528 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 PPANQ9NQ55 473 aaKnown RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 CCDC177Q9NQR7 707 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-203ENST00000444440 MAP4K5Q9Y4K4 846 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 PCDHGB7Q9Y5F8 929 aa10.34□□□□□ -0.75
SF3A1-203ENST00000444440 ICE1Q9Y2F5 2266 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms