RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 IP6K3Q96PC2 410 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 CCDC177Q9NQR7 707 aaPredicted RBP13.4□□□□□ -0.26
TREX1-202ENST00000444177 SMYD2Q9NRG4 433 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 STOX2Q9P2F5 926 aaPredicted RBP13.4□□□□□ -0.26
TREX1-202ENST00000444177 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
TREX1-202ENST00000444177 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 ANKMY1Q9P2S6 941 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
TREX1-202ENST00000444177 PTRH2Q9Y3E5 179 aaKnown RBP13.4□□□□□ -0.26
TREX1-202ENST00000444177 A0A1B0GX78 115 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 SLC16A5O15375 505 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 CNOT3O75175 753 aaKnown RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 TSPAN12O95859 305 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ALAS2P22557 587 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 FOLR3P41439 243 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ZNF460Q14592 562 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 GRM7Q14831 915 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 TRADDQ15628 312 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 PRAMEF13Q5VWM6 474 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 FRMPD2BQ6IN97 320 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 TTLL10Q6ZVT0 673 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 MRGPREQ86SM8 312 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 PTERQ96BW5 349 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 HIST1H2AHQ96KK5 128 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 HIST1H2AJQ99878 128 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ZFYVE21Q9BQ24 234 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 H2AFJQ9BTM1 129 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 PARVBQ9HBI1 364 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 CUTCQ9NTM9 273 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ZDHHC18Q9NUE0 388 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 GPR83Q9NYM4 423 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 DMGDHQ9UI17 866 aaKnown RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 G3BP2Q9UN86 482 aaKnown RBP13.39□□□□□ -0.27
TREX1-202ENST00000444177 PDE10AQ9Y233 779 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 KLK4Q9Y5K2 254 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 ESPL1Q14674 2120 aa13.39□□□□□ -0.27
TREX1-202ENST00000444177 TCRBV9S1A1TA0A576 114 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 OR2A25A4D2G3 310 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 DPM1O60762 260 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 VPS4BO75351 444 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 GSTA2P09210 222 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 ZNF37AP17032 561 aaPredicted RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 GCGRP47871 477 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 ARSFP54793 590 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 SLC12A2P55011 1212 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 FOXL2P58012 376 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 ABATP80404 500 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 PRDX1Q06830 199 aaKnown RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 PHKG1Q16816 387 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 MRPL14Q6P1L8 145 aaKnown RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 PAQR7Q86WK9 346 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 LRRC56Q8IYG6 542 aaPredicted RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 FAM26EQ8N5C1 309 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 OR2Y1Q8NGV0 311 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 CPT1CQ8TCG5 803 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 COL26A1Q96A83 441 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 CCDC138Q96M89 665 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 MFRPQ9BY79 579 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 UTP6Q9NYH9 597 aaKnown RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
TREX1-202ENST00000444177 UTP20O75691 2785 aaKnown RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 SPENQ96T58 3664 aaKnown RBP13.38□□□□□ -0.27
TREX1-202ENST00000444177 LOC105369274A0A096LPK9 316 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 IGKV1-8A0A0C4DH67 115 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 LOC102723532A0A0G2JNH3 316 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 CXorf49A8MYA2 514 aaPredicted RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 PEX12O00623 359 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 DSCR3O14972 297 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 SRPX2O60687 465 aaPredicted RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 SORBS2O94875 1100 aaKnown RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 UMODP07911 640 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 MAGEA4P43358 317 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 TAS2R39P59534 338 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 GPX6P59796 221 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 RAPSNQ13702 412 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 CYS1Q717R9 158 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 HPS6Q86YV9 775 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 TMEM151BQ8IW70 566 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 IFT20Q8IY31 132 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 814.2 ms