RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 A0A1B0GUH1 482 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CES2O00748 559 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 BMP10O95393 424 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 UMODP07911 640 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ERGP11308 486 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 EDN3P14138 238 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 COILP38432 576 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 BDKRB1P46663 353 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 OR1D4P47884 311 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 RPS15AP62244 130 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 CRADDP78560 199 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 MEF2AQ02078 507 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 MFAP5Q13361 173 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 TSTA3Q13630 321 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 GBX1Q14549 363 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ZNF169Q14929 603 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 PPP1R7Q15435 360 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ICE2Q659A1 982 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CCDC137Q6PK04 289 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 FAM180AQ6UWF9 173 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PPIL6Q8IXY8 311 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SLC34A3Q8N130 599 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CSNK1A1LQ8N752 337 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CAMKVQ8NCB2 501 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ST6GALNAC3Q8NDV1 305 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 DNAJB8Q8NHS0 232 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 LKAAEAR1Q8TD35 194 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ZNF669Q96BR6 464 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 THOC3Q96J01 351 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 C20orf96Q9NUD7 363 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 TAS2R13Q9NYV9 303 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PLEKHB1Q9UF11 243 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 TRMT6Q9UJA5 497 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 CORO1CQ9ULV4 474 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 MAD1L1Q9Y6D9 718 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 HECTD1Q9ULT8 2610 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 IGLV3-12A0A075B6K2 115 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 TRAV17A0A0B4J275 112 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 TCP11X1B4DZS4 312 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 H0YGG7 62 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 H0YIG0 161 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PGRMC1O00264 195 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 SOCS6O14544 535 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 NIPSNAP2O75323 286 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CBX6O95503 412 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SYF2O95926 243 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 CRYABP02511 175 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 SERPINA7P05543 415 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 FNTAP49354 379 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ARF3P61204 181 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 ARG2P78540 354 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 RBPJQ06330 500 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CDC16Q13042 620 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 RAPSNQ13702 412 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 KCNJ11Q14654 390 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.41□□□□□ -1.22
CD44-211ENST00000442151 PRTGQ2VWP7 1150 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ACSBG2Q5FVE4 666 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CTSL3PQ5NE16 218 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 MTFR2Q6P444 385 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 KIRREL2Q6UWL6 708 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 KIAA0408Q6ZU52 694 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SYDE1Q6ZW31 735 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 UBE2R2Q712K3 238 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 ADCK2Q7Z695 626 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PRUNE1Q86TP1 453 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PAQR7Q86WK9 346 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PARP9Q8IXQ6 854 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 MYO1HQ8N1T3 1032 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 RASGEF1CQ8N431 466 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 BCORP1Q8N888 145 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 PRELID2Q8N945 189 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
CD44-211ENST00000442151 ATL1Q8WXF7 558 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 MMABQ96EY8 250 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 PKP4Q99569 1192 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 HAUS8Q9BT25 410 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 CLK4Q9HAZ1 481 aaKnown RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 CCDC177Q9NQR7 707 aaPredicted RBP7.41□□□□□ -1.22
CD44-211ENST00000442151 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 KLHL20Q9Y2M5 609 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 HS3ST3B1Q9Y662 390 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 NFS1Q9Y697 457 aa7.41□□□□□ -1.22
CD44-211ENST00000442151 SEC16AO15027 2179 aa7.4□□□□□ -1.22
CD44-211ENST00000442151 PTPN13Q12923 2485 aa7.4□□□□□ -1.22
CD44-211ENST00000442151 KCNE1BA0A087WTH5 132 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 A0A0U1RQJ8 604 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 URADA6NGE7 173 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 GFYI3L273 518 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 HCRTR1O43613 425 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 CTSVO60911 334 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 PROCP04070 461 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 VPS41P49754 854 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 AGTR2P50052 363 aa7.4□□□□□ -1.23
CD44-211ENST00000442151 SP140Q13342 867 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms