RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SOX17Q9H6I2 414 aaPredicted RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 PARVBQ9HBI1 364 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 UTP6Q9NYH9 597 aaKnown RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 CORO1CQ9ULV4 474 aaPredicted RBP18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 PLAAQ9Y263 795 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 HS3ST3B1Q9Y662 390 aa18.03■□□□□ 0.48
HMGB3P22-201ENST00000442010 EFCAB8A8MWE9 144 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 H7BY64 318 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 HAT1O14929 419 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 TBPL1P62380 186 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 RAPSNQ13702 412 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 MYBPC3Q14896 1274 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 FASTKD3Q14CZ7 662 aaKnown RBP18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 PHKG1Q16816 387 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 KIRREL2Q6UWL6 708 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 CSNK1A1LQ8N752 337 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 CLEC1AQ8NC01 280 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 STT3BQ8TCJ2 826 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 MVB12AQ96EY5 273 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 LINGO1Q96FE5 620 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 PRAP1Q96NZ9 151 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 OLFM1Q99784 485 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 ZNF552Q9H707 407 aaPredicted RBP18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 PPANQ9NQ55 473 aaKnown RBP18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 CCDC177Q9NQR7 707 aaPredicted RBP18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 ABCF3Q9NUQ8 709 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 MOCS1Q9NZB8 636 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 C5AR2Q9P296 337 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 SH2B3Q9UQQ2 575 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 VWA7Q9Y334 891 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 SNX24Q9Y343 169 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 PSAT1Q9Y617 370 aa18.02■□□□□ 0.48
HMGB3P22-201ENST00000442010 ESPL1Q14674 2120 aa18.02■□□□□ 0.47
HMGB3P22-201ENST00000442010 P2RX6O15547 441 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 DPM1O60762 260 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 SNRPNP63162 240 aaKnown RBP18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 PDIA2Q13087 525 aaKnown RBP18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 VWA5B1Q5TIE3 1220 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 GARNL3Q5VVW2 1013 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 PRAMEF13Q5VWM6 474 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 JMJD6Q6NYC1 403 aaPredicted RBP18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 AGTRAPQ6RW13 159 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 SHISA6Q6ZSJ9 500 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 PLD3Q8IV08 490 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 Q8NA96 180 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 COL26A1Q96A83 441 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 CABS1Q96KC9 395 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 SEMA3GQ9NS98 782 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 TMEM184CQ9NVA4 438 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 CDC23Q9UJX2 597 aa18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 G3BP2Q9UN86 482 aaKnown RBP18.01■□□□□ 0.47
HMGB3P22-201ENST00000442010 SCN2AQ99250 2005 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 KCNE1BA0A087WTH5 132 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 CLEC18AA5D8T8 446 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 FOXS1O43638 330 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZGLP1P0C6A0 271 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 HRH2P25021 359 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 SLC26A3P40879 764 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 IL2P60568 153 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 MRPS25P82663 173 aaKnown RBP18■□□□□ 0.47
HMGB3P22-201ENST00000442010 KLC1Q07866 573 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 THEMIS2Q5TEJ8 643 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 FAM45BPQ6NSW5 357 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 TMEM207Q6UWW9 146 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 IGFL3Q6UXB1 125 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 CLEC18BQ6UXF7 455 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 VN1R4Q7Z5H5 301 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 AMER3Q8N944 861 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 GPATCH11Q8N954 259 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 CLEC18CQ8NCF0 446 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 FBXO36Q8NEA4 188 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 FAM45AQ8TCE6 357 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 PDLIM5Q96HC4 596 aaKnown RBP18■□□□□ 0.47
HMGB3P22-201ENST00000442010 MESP1Q9BRJ9 268 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 MCMBPQ9BTE3 642 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 SGPP1Q9BX95 441 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 PCBD2Q9H0N5 130 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 ATG10Q9H0Y0 220 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 ATP13A2Q9NQ11 1180 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZNF282Q9UDV7 671 aaPredicted RBP18■□□□□ 0.47
HMGB3P22-201ENST00000442010 FBXL4Q9UKA2 621 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 IKZF3Q9UKT9 509 aa18■□□□□ 0.47
HMGB3P22-201ENST00000442010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.47
HMGB3P22-201ENST00000442010 TXNDC9O14530 226 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 FBLP22087 321 aaKnown RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 CSNK1G2P78368 415 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 MGAT5Q09328 741 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 AIMP2Q13155 320 aaKnown RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 PDAP1Q13442 181 aaKnown RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 DSG2Q14126 1118 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 FAM53BQ14153 422 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 VWA2Q5GFL6 755 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 SLC6A19Q695T7 634 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 LCTLQ6UWM7 567 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 ADCK2Q7Z695 626 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 LAPTM4BQ86VI4 370 aa17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 ZC3HC1Q86WB0 502 aaKnown RBP17.99■□□□□ 0.47
HMGB3P22-201ENST00000442010 PALM2Q8IXS6 379 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms