RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 APLFQ8IW19 511 aaPredicted RBP20.36■□□□□ 0.85
PTPRF-207ENST00000436724 HOMEZQ8IX15 550 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 FAM160A2Q8N612 972 aaPredicted RBP20.36■□□□□ 0.85
PTPRF-207ENST00000436724 LINC01555Q8NAE3 123 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 TPSD1Q9BZJ3 242 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 YIPF3Q9GZM5 350 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 PIPSLA2A3N6 862 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 EML2O95834 649 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 SPANXN4Q5MJ08 99 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 NXPE4Q6UWF7 544 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 SLC15A3Q8IY34 581 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 MINDY1Q8N5J2 469 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 WDR92Q96MX6 357 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 PRDM6Q9NQX0 595 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 TMEM45AQ9NWC5 275 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 GID8Q9NWU2 228 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 CD300AQ9UGN4 299 aa20.36■□□□□ 0.85
PTPRF-207ENST00000436724 ACOT8O14734 319 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 LRATO95237 230 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 HOXC4P09017 264 aaPredicted RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 UBTFL6P0CB48 400 aaPredicted RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 RPS13P62277 151 aaKnown RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 LRRC36Q1X8D7 754 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 UAP1L1Q3KQV9 507 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 RABL3Q5HYI8 236 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 NOXRED1Q6NXP6 359 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 KIAA2013Q8IYS2 634 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 TMEM145Q8NBT3 493 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 GFM2Q969S9 779 aaKnown RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 WDR34Q96EX3 536 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 HOPXQ9BPY8 73 aaPredicted RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 GPR174Q9BXC1 333 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 CMTM6Q9NX76 183 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 TBC1D29Q9UFV1 150 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 KNL1Q8NG31 2342 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 A0A1W2PPV9 198 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 NPIPB8E9PQR5 432 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 LYNP07948 512 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 HTR1BP28222 390 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 AKT2P31751 481 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 CYP2A13Q16696 494 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 LCTLQ6UWM7 567 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 BHLHE22Q8NFJ8 381 aaPredicted RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 SETD7Q8WTS6 366 aaKnown RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 SH3KBP1Q96B97 665 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 BIRC7Q96CA5 298 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 CAMK1GQ96NX5 476 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 EFCAB11Q9BUY7 163 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 TMEM168Q9H0V1 697 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 CLMPQ9H6B4 373 aa20.35■□□□□ 0.85
PTPRF-207ENST00000436724 CUEDC1Q9NWM3 386 aaPredicted RBP20.35■□□□□ 0.85
PTPRF-207ENST00000436724 PXNP49023 591 aaPredicted RBP20.34■□□□□ 0.85
PTPRF-207ENST00000436724 CTBSQ01459 385 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 KRT33BQ14525 404 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 ARHGAP19Q14CB8 494 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 RNF220Q5VTB9 566 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 Q6ZSR6 202 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 TSTD1Q8NFU3 115 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 TMEM74Q96NL1 305 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 ZBTB18Q99592 522 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 KLHL4Q9C0H6 718 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 ABCD2Q9UBJ2 740 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 CHURC1-FNTBB4DL54 471 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 C10orf142B7Z368 130 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 DNAJA2O60884 412 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 IGLV3-19P01714 112 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 MLLT1Q03111 559 aaPredicted RBP20.34■□□□□ 0.85
PTPRF-207ENST00000436724 ZNF33BQ06732 778 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 TRIM25Q14258 630 aaKnown RBP20.34■□□□□ 0.85
PTPRF-207ENST00000436724 SAMD4BQ5PRF9 694 aaKnown RBP20.34■□□□□ 0.85
PTPRF-207ENST00000436724 GPR156Q8NFN8 814 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 OR13H1Q8NG92 308 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 ASB9Q96DX5 294 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 EHD1Q9H4M9 534 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 BRF2Q9HAW0 419 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 TMED5Q9Y3A6 229 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 SLCO1B1Q9Y6L6 691 aa20.34■□□□□ 0.85
PTPRF-207ENST00000436724 CROCCQ5TZA2 2017 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 B3GALT4O96024 378 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PGRP06401 933 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PRPS2P11908 318 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PEX2P28328 305 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 CLDN8P56748 225 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 RPE65Q16518 533 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 SLC30A9Q6PML9 568 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 DLEU7Q6UYE1 221 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 LAS2Q8IYD9 372 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 C1orf52Q8N6N3 182 aaKnown RBP20.33■□□□□ 0.85
PTPRF-207ENST00000436724 SLC13A3Q8WWT9 602 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 JPH3Q8WXH2 748 aaPredicted RBP20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PPM1MQ96MI6 270 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 LTB4R2Q9NPC1 389 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 SUCOQ9UBS9 1254 aaKnown RBP20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PPT2Q9UMR5 302 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 PCDHA9Q9Y5H5 950 aa20.33■□□□□ 0.85
PTPRF-207ENST00000436724 FAM170BA6NMN3 283 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 SAP18O00422 153 aaKnown RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 CASQ2O14958 399 aaPredicted RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 KCNJ13O60928 360 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 BCAS2O75934 225 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms