RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NFATC1O95644 943 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 SLC16A8O95907 504 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 MYCLP1P12525 358 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 PPIBP23284 216 aaKnown RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 TPD52P55327 224 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 PPP2R2BQ00005 443 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 UGT8Q16880 541 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 ZIK1Q3SY52 487 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 RBM48Q5RL73 367 aaKnown RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 TMEM240Q5SV17 173 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 CAPN13Q6MZZ7 669 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 MED27Q6P2C8 311 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 EGFL6Q8IUX8 553 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 ERI1Q8IV48 349 aaKnown RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 PGBD3Q8N328 593 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 ZNF366Q8N895 744 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 OR7A2PQ8NGA2 310 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 BADQ92934 168 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 HIC2Q96JB3 615 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 ZNF514Q96K75 400 aaPredicted RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 TOR3AQ9H497 397 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 C3orf18Q9UK00 162 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 DYRK1BQ9Y463 629 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 CLIC1O00299 241 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 C1orf105O95561 183 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ENGP17813 658 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 GPX2P18283 190 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 SLC5A2P31639 672 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 IRS1P35568 1242 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 MAGEA2P43356 314 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 E2F2Q14209 437 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 EIF4HQ15056 248 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 ANXA8L1Q5VT79 327 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 CPZQ66K79 652 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 CES5AQ6NT32 575 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 SPESP1Q6UW49 350 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 CAMKMTQ7Z624 323 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 THAP5Q7Z6K1 395 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 C12orf40Q86WS4 652 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 CDC26Q8NHZ8 85 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 TMIGD2Q96BF3 282 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 CXorf40BQ96DE9 158 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 EFCAB11Q9BUY7 163 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 NPLQ9BXD5 320 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 SOX17Q9H6I2 414 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 BTNL2Q9UIR0 455 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 CROCCQ5TZA2 2017 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 NPC1O15118 1278 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 SLC34A2O95436 690 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 RB1P06400 928 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 RPL10P27635 214 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 GPR1P46091 355 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 RAD23AP54725 363 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 PLCL1Q15111 1095 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 HNRNPA1L2Q32P51 320 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 CCSMST1Q4G0I0 132 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZNF658BQ4V348 819 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 PAGE2BQ5JRK9 111 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZNF621Q6ZSS3 439 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZDHHC21Q8IVQ6 265 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 RNF175Q8N4F7 328 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 OR7G3Q8NG95 312 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ZNF420Q8TAQ5 688 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 HERVK_113Q902F9 699 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 SMG7Q92540 1137 aaKnown RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 TBC1D20Q96BZ9 403 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 C11orf24Q96F05 449 aaPredicted RBP13.23□□□□□ -0.29
THBS3-202ENST00000428962 TUBA1CQ9BQE3 449 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 ITM2CQ9NQX7 267 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 DYRK4Q9NR20 520 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 AASDHPPTQ9NRN7 309 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 BLOC1S6Q9UL45 172 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 AP1M2Q9Y6Q5 423 aa13.23□□□□□ -0.29
THBS3-202ENST00000428962 MGAT4DA6NG13 374 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 ANXA4P09525 319 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 PDHA2P29803 388 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 TIA1P31483 386 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■■■□ 21.3
THBS3-202ENST00000428962 DCTP40126 519 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 ARHGDIAP52565 204 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 WNT3P56703 355 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 TBPL1P62380 186 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 DPTQ07507 201 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms