RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 IHHQ14623 411 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 GRM3Q14832 879 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 PDGFRLQ15198 375 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 PARP15Q460N3 678 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MPPE1Q53F39 396 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 FSCBQ5H9T9 825 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 PIK3CD-AS1Q5SR53 167 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 KYAT3Q6YP21 454 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 TPRG1Q6ZUI0 275 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 GET4Q7L5D6 327 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ADIPOR2Q86V24 386 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 LONP2Q86WA8 852 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 LGI2Q8N0V4 545 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 FBXL14Q8N1E6 418 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 TEX26Q8N6G2 289 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ALLCQ8N6M5 410 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HJURPQ8NCD3 748 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 LSM14AQ8ND56 463 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 DEPDC1BQ8WUY9 529 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ZFPM2Q8WW38 1151 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MAIP1Q8WWC4 291 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ASB12Q8WXK4 309 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 PMM1Q92871 262 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ARHGEF2Q92974 986 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 TTC17Q96AE7 1141 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HDAC11Q96DB2 347 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 RPRD1AQ96P16 312 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 QKIQ96PU8 341 aaKnown RBP eCLIP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 IL12RB2Q99665 862 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 DDX50Q9BQ39 737 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 FEM1AQ9BSK4 669 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 AP1M1Q9BXS5 423 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SLC2A11Q9BYW1 496 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SLC39A8Q9C0K1 460 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 BRD8Q9H0E9 1235 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MAGEH1Q9H213 219 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 CATSPERBQ9H7T0 1116 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ZFP14Q9HCL3 533 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SPHK2Q9NRA0 654 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 COX16Q9P0S2 106 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 LSM7Q9UK45 103 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 DNPEPQ9ULA0 475 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 RAI2Q9Y5P3 530 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 CREBBPQ92793 2442 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 COL4A2P08572 1712 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HELZP42694 1942 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ATMQ13315 3056 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 A0A0D9SEW6 157 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GOLGA6CA6NDK9 693 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GOLGA6BA6NDN3 693 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 C5orf60A6NFR6 353 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CLCA1A8K7I4 914 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 RASA4BC9J798 803 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 H0Y626 953 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TRDMT1O14717 391 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 APOL1O14791 398 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 AREL1O15033 823 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 RASA4O43374 803 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 PRAMEF11O60813 436 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ZNF821O75541 412 aaPredicted RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TRIM16O95361 564 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GOLGA6DP0CG33 693 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 IRF1P10914 325 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ARSAP15289 507 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 RHCEP18577 417 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CCNCP24863 283 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 STIP1P31948 543 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SLC8A1P32418 973 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SERPINB6P35237 376 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GJC1P36383 396 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 OPRD1P41143 372 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 EIF2DP41214 584 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CXCL12P48061 93 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GNA12Q03113 381 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CKAP4Q07065 602 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SLC12A1Q13621 1099 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ENPP2Q13822 863 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 BYSLQ13895 437 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 HNRNPDQ14103 355 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DAG1Q14118 895 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 PDK1Q15118 436 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 PLEKHG6Q3KR16 790 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SLC45A4Q5BKX6 768 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TMEM196Q5HYL7 178 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 RABGAP1LQ5R372 815 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SEL1L2Q5TEA6 688 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 FAXCQ5TGI0 409 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 LIPMQ5VYY2 423 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TMEM215Q68D42 235 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DUPD1Q68J44 220 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TCEAL6Q6IPX3 200 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ACSM6Q6P461 480 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TMCO3Q6UWJ1 677 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 LRRC31Q6UY01 552 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 Q6ZTC4 211 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CEP112Q8N8E3 955 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DCAF4L2Q8NA75 395 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GLIS1Q8NBF1 620 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 MNS1Q8NEH6 495 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms