RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MATN1P21941 496 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 ANKS1BQ7Z6G8 1248 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 PHC2Q8IXK0 858 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 NIPA2Q8N8Q9 360 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 C7orf50Q9BRJ6 194 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 GSTM2P28161 218 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 JAGN1Q8N5M9 183 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 SETD1AO15047 1707 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CITO14578 2027 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 IFNA5P01569 189 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 RBMXP38159 391 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 ACTR1BP42025 376 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 NDUFV1P49821 464 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 KIAA1614Q5VZ46 1190 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 FAM129CQ86XR2 697 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 ORAI3Q9BRQ5 295 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 RAB9BQ9NP90 201 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 A0A1W2PRB8 838 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 KLRC4O43908 158 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 GNSP15586 552 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 PSMA6P60900 246 aaKnown RBP14.08□□□□□ -0.15
PTPN13-203ENST00000427191 QPCTQ16769 361 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 CIR1Q86X95 450 aaPredicted RBP14.08□□□□□ -0.15
PTPN13-203ENST00000427191 CLIP4Q8N3C7 705 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 ALG3Q92685 438 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 HEPHQ9BQS7 1158 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 ADAM7Q9H2U9 754 aa14.08□□□□□ -0.15
PTPN13-203ENST00000427191 HSBP1L1C9JCN9 74 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 AGXTP21549 392 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 TLE2Q04725 743 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 SLC8B1Q6J4K2 584 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF367Q7RTV3 350 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF641Q96N77 438 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CADM1Q9BY67 442 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 TLR6Q9Y2C9 796 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 VNN2O95498 520 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 MSX2P35548 267 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 DLSTP36957 453 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 DUOXA1Q1HG43 343 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 GFOD2Q3B7J2 385 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CHERPQ8IWX8 916 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 OR52E4Q8NGH9 312 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 HAS1Q92839 578 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CCSER2Q9H7U1 834 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 POLMQ9NP87 494 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 GDI2P50395 445 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 DECR1Q16698 335 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 UBQLNLQ8IYU4 475 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 EBPLQ9BY08 206 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM165Q9HC07 324 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 AGAP5A6NIR3 686 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 PRKYO43930 277 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 SP2Q02086 613 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 INTS5Q6P9B9 1019 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 IQCHQ86VS3 1027 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 FBXO22Q8NEZ5 403 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 JSRP1Q96MG2 331 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 LAMP5Q9UJQ1 280 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 A0A1B0GVI7 797 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CFL1P23528 166 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 SLC6A6P31641 620 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ANKRD46Q86W74 232 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 MFSD8Q8NHS3 518 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ST6GALNAC4Q9H4F1 302 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 CHRAC1Q9NRG0 131 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 RAD51DO75771 328 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ACTA2P62736 377 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ACTG2P63267 376 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 KHDC1Q4VXA5 237 aaKnown RBP14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ALKBH2Q6NS38 261 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 MARCH9Q86YJ5 346 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 ZFAND2BQ8WV99 257 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 NMUR1Q9HB89 426 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 HCN2Q9UL51 889 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 TIMM22Q9Y584 194 aa14.08□□□□□ -0.16
PTPN13-203ENST00000427191 FFAR2O15552 330 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ABCB7O75027 752 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 KCNC3Q14003 757 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM164Q5U3C3 297 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 PSD4Q8NDX1 1056 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 OXSMQ9NWU1 459 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 H0YAE9 185 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 CCRL2O00421 344 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 EI24O14681 340 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 INMTO95050 263 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 TAF10Q12962 218 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 BCL2A1Q16548 175 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-203ENST00000427191 UBXN11Q5T124 520 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-203ENST00000427191 COPS5Q92905 334 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms