RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ITGA1P56199 1179 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 PCBP2Q15366 365 aaKnown RBP eCLIP23.45■■□□□ 1.341e-10■■□□□ 11.4
VEGFA-209ENST00000425836 PDK4Q16654 411 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 PRAMEF17Q5VTA0 474 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 FRMPD2BQ6IN97 320 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 PLD3Q8IV08 490 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 BANPQ8N9N5 519 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 RNF31Q96EP0 1072 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 CAPS2Q9BXY5 557 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 SPRY4Q9C004 299 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 SYNPO2LQ9H987 977 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 GPRC5BQ9NZH0 403 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 ACSL6Q9UKU0 697 aa23.45■■□□□ 1.34
VEGFA-209ENST00000425836 LOC105369274A0A096LPK9 316 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 LOC102723532A0A0G2JNH3 316 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 LRRC14BA6NHZ5 514 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 K7EPI3 171 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 SIX3O95343 332 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ZNF28P17035 718 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 EPORP19235 508 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 NXPE4Q6UWF7 544 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 OR4N4Q8N0Y3 316 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 SNX31Q8N9S9 440 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 FGF11Q92914 225 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ZNF285Q96NJ3 590 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 OR2A5Q96R48 311 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 SELENOSQ9BQE4 189 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 MKS1Q9NXB0 559 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 OPTCQ9UBM4 332 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 TNPO3Q9Y5L0 923 aaKnown RBP23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ADAMTS20P59510 1910 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 E7EQ34 232 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 STX16-NPEPL1H3BU86 382 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 STX16O14662 325 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 SRPX2O60687 465 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-209ENST00000425836 OR2B3O76000 313 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 GNAZP19086 355 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 TNFAIP8L3Q5GJ75 292 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 SLCO4C1Q6ZQN7 724 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 TMPRSS11BQ86T26 416 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ZFAND4Q86XD8 727 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ULBP3Q9BZM4 244 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 C12orf65Q9H3J6 166 aaKnown RBP23.44■■□□□ 1.34
VEGFA-209ENST00000425836 CENPHQ9H3R5 247 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 PELI2Q9HAT8 420 aa23.44■■□□□ 1.34
VEGFA-209ENST00000425836 ASPMQ8IZT6 3477 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 ANKRD12Q6UB98 2062 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 FEZF1A0PJY2 475 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 A8MT66 165 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 TLX3O43711 291 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-209ENST00000425836 DLX3O60479 287 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 PLIN3O60664 434 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 STK17BO94768 372 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 PROCP04070 461 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 CREB1P16220 341 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 TAC1P20366 129 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 CD82P27701 267 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 VSX2P58304 361 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-209ENST00000425836 MEF2AQ02078 507 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-209ENST00000425836 TMEM126BQ8IUX1 230 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 GPR135Q8IZ08 494 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 PGM2Q96G03 612 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 APOPT1Q96IL0 206 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 SPNS1Q9H2V7 528 aa23.43■■□□□ 1.34
VEGFA-209ENST00000425836 H0YGG7 62 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 LCMT2O60294 686 aaKnown RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 PRAMEF4O60810 478 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 SCRG1O75711 98 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 KIAA0754O94854 1291 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 C1GALT1C1LP0DN25 315 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 VARSP26640 1264 aaKnown RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 EEF1DP29692 281 aaKnown RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 ARF3P61204 181 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 CCDC153Q494R4 210 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 PRAMEF9Q5VWM5 478 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 METTL2BQ6P1Q9 378 aaKnown RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 TEX9Q8N6V9 391 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 ZNF740Q8NDX6 193 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 SMC6Q96SB8 1091 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 ENAMQ9NRM1 1142 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 SENP1Q9P0U3 644 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 TMEM184BQ9Y519 407 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-209ENST00000425836 PCDHB3Q9Y5E6 796 aa23.42■■□□□ 1.34
VEGFA-209ENST00000425836 KCNE1BA0A087WTH5 132 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 CLGNO14967 610 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 ZNF749O43361 778 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 SPAG7O75391 227 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 NTRK1P04629 796 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 ATP5F1P24539 256 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-209ENST00000425836 GRK3P35626 688 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 BCL6P41182 706 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 RPS15AP62244 130 aaKnown RBP23.41■■□□□ 1.34
VEGFA-209ENST00000425836 NFKB2Q00653 900 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 TCTE1Q5JU00 501 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 WASHC2DQ5SRD0 308 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 ATG9BQ674R7 924 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 EXOC3L1Q86VI1 746 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 ZNF655Q8N720 491 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-209ENST00000425836 SARGQ9BW04 601 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 STARD5Q9NSY2 213 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms