RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PLCD4Q9BRC7 762 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MENTQ9BUN1 341 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IL22Q9GZX6 179 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CCDC68Q9H2F9 335 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SLC2A6Q9UGQ3 507 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LOC102723996A0A087X1L8 192 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PABPN1LA6NDY0 278 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 H0YIG0 161 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PRRG2O14669 202 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ESR1P03372 595 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ATP5DP30049 168 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FMO4P31512 558 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GRK3P35626 688 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 BDKRB1P46663 353 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SKP1P63208 163 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 OC90Q02509 493 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PRDX1Q06830 199 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PTK6Q13882 451 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GRB7Q14451 532 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PRTGQ2VWP7 1150 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 AADACL2Q6P093 401 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GSTA5Q7RTV2 222 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CPEB2Q7Z5Q1 589 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SPPL2CQ8IUH8 684 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SLC5A8Q8N695 610 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 RNF214Q8ND24 703 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PSMF1Q92530 271 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CYTH2Q99418 400 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FAM129AQ9BZQ8 928 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TFR2Q9UP52 801 aa11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 RUVBL1Q9Y265 456 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB3-203ENST00000425319 A0A0A6YYC8 382 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 I3L1I5 382 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TSPAN12O95859 305 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SYF2O95926 243 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ITGAMP11215 1152 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 IL10P22301 178 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PSMB5P28074 263 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GDF10P55107 478 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SESN2P58004 480 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ACER2Q5QJU3 275 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PLAG1Q6DJT9 500 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NIPAL1Q6NVV3 410 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TMEM205Q6UW68 189 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NEK10Q6ZWH5 1172 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ZNF534Q76KX8 674 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LDB1Q86U70 411 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PALM2Q8IXS6 379 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GHDCQ8N2G8 530 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TBC1D19Q8N5T2 526 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CAMKVQ8NCB2 501 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 M1APQ8TC57 530 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ALG3Q92685 438 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LPAR4Q99677 370 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CHRAC1Q9NRG0 131 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PCYOX1Q9UHG3 505 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NFS1Q9Y697 457 aa11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SEC16AO15027 2179 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 USP27XA6NNY8 438 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MATN4O95460 622 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MST1P26927 711 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MEF2AQ02078 507 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ICE2Q659A1 982 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TMEM211Q6ICI0 200 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SUSD1Q6UWL2 747 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PAQR7Q86WK9 346 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TMEM151BQ8IW70 566 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GPATCH11Q8N954 259 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GABPB2Q8TAK5 448 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MAIP1Q8WWC4 291 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TMEM125Q96AQ2 219 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 C14orf79Q96F83 325 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 IMMP1LQ96LU5 166 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 C10orf90Q96M02 699 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ZNF778Q96MU6 729 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GPR137Q96N19 417 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 P2RY12Q9H244 342 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SLC24A3Q9HC58 644 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ANKHQ9HCJ1 492 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TMEM184CQ9NVA4 438 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 STOX2Q9P2F5 926 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TAC3Q9UHF0 121 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 DUSP10Q9Y6W6 482 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MAGEB16A2A368 324 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NPIPA5E9PKD4 350 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ASNA1O43681 348 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LIASO43766 372 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KIF5CO60282 957 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms