RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 KLHL35Q6PF15 583 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 SUSD1Q6UWL2 747 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 PRR23CQ6ZRP0 262 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 SPATA19Q7Z5L4 167 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 CLNKQ7Z7G1 428 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 CARFQ8N187 725 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 KRT78Q8N1N4 520 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 FITM2Q8N6M3 262 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 TTLQ8NG68 377 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR52B2Q96RD2 323 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 RTKNQ9BST9 563 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 TAC3Q9UHF0 121 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 PLAGL1Q9UM63 463 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 SNX7Q9UNH6 387 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 TIMM22Q9Y584 194 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
SHMT1P1-201ENST00000419974 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CCT8L1PA6NM43 557 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 C2orf74A8MZ97 194 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 RGS14O43566 566 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CER1O95813 267 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 GLB1P16278 677 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 PEBP1P30086 187 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ARFIP1P53367 373 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 IFT88Q13099 833 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ABRAXAS2Q15018 415 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CPSF6Q16630 551 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ZSCAN26Q16670 478 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 GALNTL6Q49A17 601 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 THEMIS2Q5TEJ8 643 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ZCCHC8Q6NZY4 707 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 MTDHQ86UE4 582 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR7G3Q8NG95 312 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR4E2Q8NGC2 313 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR4C6Q8NH72 309 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 PATE1Q8WXA2 126 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CCT6BQ92526 530 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ZUFSPQ96AP4 578 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 C11orf24Q96F05 449 aaPredicted RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 PPP3R2Q96LZ3 170 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 C3orf30Q96M34 536 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 RILPQ96NA2 401 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ELOVL6Q9H5J4 265 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 AKTIPQ9H8T0 292 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 SAR1AQ9NR31 198 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 UCKL1Q9NWZ5 548 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CDV3Q9UKY7 258 aaKnown RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 ZNF490Q9ULM2 529 aaPredicted RBP13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 PCDHGB2Q9Y5G2 931 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 CACNA1EQ15878 2313 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
SHMT1P1-201ENST00000419974 IGKV1-8A0A0C4DH67 115 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 PIPSLA2A3N6 862 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR5K3A6NET4 321 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 CAPN14A8MX76 684 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 BTN3A3O00478 584 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 PPM1DO15297 605 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 ALPPL2P10696 532 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 LBPP18428 481 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 CMPK1P30085 196 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 ACADVLP49748 655 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 CCT8P50990 548 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 LIMK1P53667 647 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 REEP5Q00765 189 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 EMX2Q04743 252 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 MAD2L1Q13257 205 aaPredicted RBP13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 KIAA0040Q15053 153 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 GSTA3Q16772 222 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 TMIGD1Q6UXZ0 262 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 TMPRSS11BQ86T26 416 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 OOSP2Q86WS3 158 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 DCBLD1Q8N8Z6 715 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 THAP11Q96EK4 314 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 FCRL1Q96LA6 429 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 XKR8Q9H6D3 395 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 ENAMQ9NRM1 1142 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 SH2B3Q9UQQ2 575 aa13.71□□□□□ -0.21
SHMT1P1-201ENST00000419974 TRBC2A0A5B9 178 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 B4DGG1 531 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms