RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SPCS2Q15005 226 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ACOX1Q15067 660 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GTF2IRD2BQ6EKJ0 949 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DUS1LQ6P1R4 473 aaKnown RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GTF2IRD2Q86UP8 949 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SMG9Q9H0W8 520 aaKnown RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SELENONQ9NZV5 590 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HSPE1-MOB4S4R3N1 261 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LAG3P18627 525 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ALDH4A1P30038 563 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PBLDP30039 288 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HLA-FP30511 346 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HNF4AP41235 474 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KCNC3Q14003 757 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ANXA8L1Q5VT79 327 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KIAA1614Q5VZ46 1190 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GAREM2Q75VX8 874 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ANKRD13BQ86YJ7 626 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RAVER1Q8IY67 606 aaKnown RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CLECL1Q8IZS7 167 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC39A11Q8N1S5 342 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TIFAQ96CG3 184 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FZD4Q9ULV1 537 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CRATP43155 626 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PRIM2P49643 509 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KEAP1Q14145 624 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 Q6ZVL8 140 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CEP68Q76N32 757 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SYTL1Q8IYJ3 562 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ASAH2Q9NR71 780 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PIKFYVEQ9Y2I7 2098 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GBF1Q92538 1859 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GREM1O60565 184 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OLFM2O95897 454 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF30P17039 623 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CDH3P22223 829 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAP2K4P45985 399 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RXRGP48443 463 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DAPP51397 102 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CCR3P51677 355 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DOC2AQ14183 400 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BRAT1Q6PJG6 821 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AGTRAPQ6RW13 159 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TSPYL5Q86VY4 417 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 C1orf52Q8N6N3 182 aaKnown RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 C11orf65Q8NCR3 313 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CPEB1Q9BZB8 566 aaKnown RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VPS4AQ9UN37 437 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NUP214P35658 2090 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 UGDHO60701 494 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KCNK5O95279 499 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HTR1AP08908 422 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 C1SP09871 688 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LAMP1P11279 417 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PRPH2P23942 346 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OPRL1P41146 370 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAGEA2P43356 314 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC7A9P82251 487 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VLDLRP98155 873 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC14A1Q13336 389 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 UGT8Q16880 541 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PIWIL3Q7Z3Z3 882 aaKnown RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMCO2Q7Z6W1 182 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MCCC1Q96RQ3 725 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MYOCQ99972 504 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SPASTQ9UBP0 616 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 E7EQ34 232 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GFYI3L273 518 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SH3BP5O60239 455 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 C9P02748 559 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MVKQ03426 396 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF33BQ06732 778 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HKDC1Q2TB90 917 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PAGE2BQ5JRK9 111 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms