RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CRB2Q5IJ48 1285 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ISCA2Q86U28 154 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 RNF31Q96EP0 1072 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 UROC1Q96N76 676 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 MNTQ99583 582 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM27Q9HBJ8 222 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ERVK13-1Q9NX77 482 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 AKAP7Q9P0M2 348 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 KIAA1522Q9P206 1035 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 NOTOA8MTQ0 251 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 H3BSH0 61 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 M0QX08 132 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 PSMD9O00233 223 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 CHST10O43529 356 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 ESR1P03372 595 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 CSN2P05814 226 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 NFKB2Q00653 900 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 TSTQ16762 297 aaKnown RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 OR6K6Q8NGW6 343 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 C8orf48Q96LL4 319 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 COL21A1Q96P44 957 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 HAPLN3Q96S86 360 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 DPH2Q9BQC3 489 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-202ENST00000415950 SLC27A6Q9Y2P4 619 aa12.56□□□□□ -0.4
SCN1B-202ENST00000415950 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 BTBD19C9JJ37 291 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 GPR39O43194 453 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RBMXL2O75526 392 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CH25HO95992 272 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 C8BP07358 591 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 PDHA2P29803 388 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 HLCSP50747 726 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 SMU1Q2TAY7 513 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 SLC30A6Q6NXT4 461 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CYP2U1Q7Z449 544 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 HMGN2P46Q86SG4 172 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 IGFN1Q86VF2 1251 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RBM12BQ8IXT5 1001 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM199Q8N511 208 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 ZCCHC10Q8TBK6 192 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 DPP7Q9UHL4 492 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CARD8Q9Y2G2 431 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 A0A0X1KG70 313 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 SLC9A3R1O14745 358 aaPredicted RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 GABRDO14764 452 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 BCAS1O75363 584 aaPredicted RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CKMT1AP12532 417 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CD1EP15812 388 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RPL26P61254 145 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 DEFA5Q01523 94 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 PRSS58Q8IYP2 241 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF347Q96SE7 839 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 TOPAZ1Q8N9V7 1692 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 URADA6NGE7 173 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RASAL1O95294 804 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 TGFB1P01137 390 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 CDKN1CP49918 316 aaPredicted RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 IL10RBQ08334 325 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 VTCN1Q7Z7D3 282 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 SLC22A15Q8IZD6 547 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 ZUFSPQ96AP4 578 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 PTERQ96BW5 349 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
SCN1B-202ENST00000415950 ZCCHC3Q9NUD5 404 aaKnown RBP12.55□□□□□ -0.4
SCN1B-202ENST00000415950 LCKP06239 509 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PTGER3P43115 390 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 AVPR1BP47901 424 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ACADVLP49748 655 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TSPAN5P62079 268 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 UGT8Q16880 541 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 USP43Q70EL4 1123 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF615Q8N8J6 731 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 OR4K1Q8NGD4 311 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GRPEL2Q8TAA5 225 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 SMG7Q92540 1137 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TRPS1Q9UHF7 1281 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 KRBA1A5PL33 1030 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 OR6C75A6NL08 312 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 S1PR4O95977 384 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GSTT2P0CG29 244 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms