RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 WISP1O95388 367 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 CD63P08962 238 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 PIM1P11309 404 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-207ENST00000413642 SSTR1P30872 391 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 PGDP52209 483 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 ZNF460Q14592 562 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 PRAMEF13Q5VWM6 474 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 TEX19Q8NA77 164 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 CABS1Q96KC9 395 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 ZNF304Q9HCX3 659 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 CORO1CQ9ULV4 474 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-207ENST00000413642 PCDHGA9Q9Y5G4 932 aaKnown RBP25.09■■□□□ 1.61
VEGFA-207ENST00000413642 SEC16AO15027 2179 aa25.09■■□□□ 1.61
VEGFA-207ENST00000413642 FFAR3O14843 346 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 GPR42O15529 346 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 ALBP02768 609 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 EZRP15311 586 aaKnown RBP25.08■■□□□ 1.61
VEGFA-207ENST00000413642 MUM1Q2TAK8 710 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 PRSS58Q8IYP2 241 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 PYROXD1Q8WU10 500 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 MESP1Q9BRJ9 268 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 SLC26A1Q9H2B4 701 aa25.08■■□□□ 1.61
VEGFA-207ENST00000413642 FAM95CA0A1B0GW59 222 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 CXorf49A8MYA2 514 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-207ENST00000413642 PEX12O00623 359 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 ALOX12BO75342 701 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 RRADP55042 308 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 TAS2R39P59534 338 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 IGFBP7Q16270 282 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 DCAF10Q5QP82 559 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 PYCR2Q96C36 320 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 MACROD1Q9BQ69 325 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 WDR54Q9H977 334 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 UTP6Q9NYH9 597 aaKnown RBP25.07■■□□□ 1.6
VEGFA-207ENST00000413642 CDC23Q9UJX2 597 aa25.07■■□□□ 1.6
VEGFA-207ENST00000413642 MRPS2Q9Y399 296 aaKnown RBP25.07■■□□□ 1.6
VEGFA-207ENST00000413642 VSTM2BA6NLU5 285 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 NDC80O14777 642 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 HIST1H2AGP0C0S8 130 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-207ENST00000413642 HIST1H2ADP20671 130 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 CSNK1G2P78368 415 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 NADK2Q4G0N4 442 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 SLC26A11Q86WA9 606 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 ARHGEF39Q8N4T4 335 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 RERGQ96A58 199 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-207ENST00000413642 HIST1H2AHQ96KK5 128 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 IP6K3Q96PC2 410 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 HIST1H2AJQ99878 128 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 MCMBPQ9BTE3 642 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 H2AFJQ9BTM1 129 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 SGPP1Q9BX95 441 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 TMEM184CQ9NVA4 438 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 ARL15Q9NXU5 204 aa25.06■■□□□ 1.6
VEGFA-207ENST00000413642 CDC7O00311 574 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 FOXS1O43638 330 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 GUCA1CO95843 209 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 MMP11P24347 488 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 PLTPP55058 493 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 RELAQ04206 551 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 VWA2Q5GFL6 755 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 PRMT9Q6P2P2 845 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 ZDHHC24Q6UX98 284 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 VN1R4Q7Z5H5 301 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 CEP97Q8IW35 865 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 STT3BQ8TCJ2 826 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 ANKRD49Q8WVL7 239 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 FER1L6-AS2Q96M78 137 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 HS3ST3B1Q9Y662 390 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 BSNQ9UPA5 3926 aa25.05■■□□□ 1.6
VEGFA-207ENST00000413642 A0A0A6YYC8 382 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 I3L1I5 382 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 SOCS6O14544 535 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 CDH1P12830 882 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 NPPBP16860 134 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 ZNF37AP17032 561 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 FBLP22087 321 aaKnown RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 CSRP3P50461 194 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 EMP3P54852 163 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 MLLT10P55197 1068 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 GPX6P59796 221 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 KCNC4Q03721 635 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 SBSNQ6UWP8 590 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 SHISA5Q8N114 240 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 PDLIM5Q96HC4 596 aaKnown RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 C16orf45Q96MC5 204 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 GPR83Q9NYM4 423 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 FBXL4Q9UKA2 621 aa25.04■■□□□ 1.6
VEGFA-207ENST00000413642 MTO1Q9Y2Z2 717 aaKnown RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 UTP11Q9Y3A2 253 aaKnown RBP25.04■■□□□ 1.6
VEGFA-207ENST00000413642 FEZF1A0PJY2 475 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 NPEPPSL1A6NEC2 478 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 EIF3HO15372 352 aaKnown RBP eCLIP25.03■■□□□ 1.66e-7■■□□□ 13.1
VEGFA-207ENST00000413642 SLC7A5Q01650 507 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 KLC1Q07866 573 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 SYT16Q17RD7 645 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 KIRREL2Q6UWL6 708 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 LCTLQ6UWM7 567 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 ZNF572Q7Z3I7 529 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-207ENST00000413642 LAPTM4BQ86VI4 370 aa25.03■■□□□ 1.6
VEGFA-207ENST00000413642 C17orf64Q86WR6 236 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms