RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PACSIN2Q9UNF0 486 aaPredicted RBP11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PCDHGB6Q9Y5F9 930 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PCNX1Q96RV3 2341 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ASPDHA6ND91 283 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ARHGEF33A8MVX0 844 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 MIF4GDA9UHW6 222 aaKnown RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 MYO1CO00159 1063 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 CD3EAPO15446 510 aaKnown RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 P2RX6O15547 441 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 LIASO43766 372 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 SNRPB2P08579 225 aaKnown RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ERVK-10P10266 1014 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 FAM53BQ14153 422 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ARHGAP19Q14CB8 494 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 SYT16Q17RD7 645 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 PCID2Q5JVF3 399 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ABHD17BQ5VST6 288 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 FAAH2Q6GMR7 532 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 LRRC8BQ6P9F7 803 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 NEK10Q6ZWH5 1172 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 SHISA5Q8N114 240 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 OR9A1PQ8NGU1 263 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 MAGEC3Q8TD91 643 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 SMPDL3AQ92484 453 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 MMABQ96EY8 250 aaPredicted RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 FOPNLQ96NB1 174 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ACAT2Q9BWD1 397 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 MRPS30Q9NP92 439 aaKnown RBP11.52□□□□□ -0.57
LIMS2-210ENST00000413578 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 TINAGQ9UJW2 476 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 ANAPC5Q9UJX4 755 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 AMFRQ9UKV5 643 aa11.52□□□□□ -0.57
LIMS2-210ENST00000413578 NCOA6Q14686 2063 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 A0A0A6YYC8 382 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 I3L1I5 382 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 VPS26AO75436 327 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PSIP1O75475 530 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 CYC1P08574 325 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 EZRP15311 586 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 KIR3DL1P43629 444 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 ADARP55265 1226 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 KRTAP10-9P60411 292 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 MAT1AQ00266 395 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 RBPJQ06330 500 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 ZNF33BQ06732 778 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PRDX1Q06830 199 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 ZNF766Q5HY98 468 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 SUSD1Q6UWL2 747 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PEX26Q7Z412 305 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PRUNE1Q86TP1 453 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 CHERPQ8IWX8 916 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 MDS2Q8NDY4 140 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 ACRBPQ8NEB7 543 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PPHLN1Q8NEY8 458 aaKnown RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 SUN3Q8TAQ9 357 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 GSDMBQ8TAX9 411 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 SKA2Q8WVK7 121 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 LPGAT1Q92604 370 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 GPR137Q96N19 417 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 PANX2Q96RD6 677 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 NPAS2Q99743 824 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 TREX2Q9BQ50 279 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-210ENST00000413578 VN1R1Q9GZP7 353 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 DRC3Q9H069 523 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 MKL2Q9ULH7 1088 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 CPAMD8Q8IZJ3 1885 aa11.51□□□□□ -0.57
LIMS2-210ENST00000413578 E7ENX8 843 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 NIPSNAP2O75323 286 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 CLDN14O95500 239 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 IFNB1P01574 187 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 ANXA5P08758 320 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 C8orf89P0DMQ9 161 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 SSTR2P30874 369 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 EIF3BP55884 814 aaKnown RBP11.5□□□□□ -0.57
LIMS2-210ENST00000413578 TAP2Q03519 686 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 TYSND1Q2T9J0 566 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 ANKRD20A4Q4UJ75 823 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 ICE2Q659A1 982 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 PLAG1Q6DJT9 500 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 SPNS3Q6ZMD2 512 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 LANCL3Q6ZV70 420 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 SIAH3Q8IW03 269 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 LRRC56Q8IYG6 542 aaPredicted RBP11.5□□□□□ -0.57
LIMS2-210ENST00000413578 BEST3Q8N1M1 668 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 MTFMTQ96DP5 389 aaKnown RBP11.5□□□□□ -0.57
LIMS2-210ENST00000413578 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 SCMH1Q96GD3 660 aa11.5□□□□□ -0.57
LIMS2-210ENST00000413578 FRMD8P1Q9BZ68 369 aaPredicted RBP11.5□□□□□ -0.57
LIMS2-210ENST00000413578 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms