RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PPP3R1P63098 170 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RHAGQ02094 409 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ID2Q02363 134 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SNAPC1Q16533 368 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM198Q66K66 360 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 C1orf52Q8N6N3 182 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 UXS1Q8NBZ7 420 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 GLB1L3Q8NCI6 653 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR4K14Q8NGD5 310 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DNAJB8Q8NHS0 232 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 THAP3Q8WTV1 239 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 KBTBD7Q8WVZ9 684 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ELSPBP1Q96BH3 223 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CDK15Q96Q40 435 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 G6PC3Q9BUM1 346 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FAM117AQ9C073 453 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC40A1Q9NP59 571 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZCCHC3Q9NUD5 404 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OBP2AQ9NY56 170 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CAPN8A6NHC0 703 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 A8MVJ9 347 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NPIPA2E9PIF3 369 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NPIPA3F8WFD2 350 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 H7BY64 318 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MANBAO00462 879 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 UBOX5O94941 541 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CCNB2O95067 398 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DLGAP3O95886 979 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 EGFP01133 1207 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ANPEPP15144 967 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 HSD11B1P28845 292 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DMTNQ08495 405 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TLR1Q15399 786 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 WASHC2DQ5SRD0 308 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PDZK1Q5T2W1 519 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ALG1LQ6GMV1 187 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 KLHDC10Q6PID8 442 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ANKRD46Q86W74 232 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF761Q86XN6 746 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CHERPQ8IWX8 916 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZSCAN4Q8NAM6 433 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CHST14Q8NCH0 376 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SNX33Q8WV41 574 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MOAP1Q96BY2 351 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PRAP1Q96NZ9 151 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NPAS2Q99743 824 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PRRX2Q99811 253 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC35A5Q9BS91 424 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 HPF1Q9NWY4 346 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MOCS1Q9NZB8 636 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SH3GLB1Q9Y371 365 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CIB4A0PJX0 185 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ELOVL7A1L3X0 281 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FADS2P1A8MWK0 482 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 H7C0S8 307 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TAF4O00268 1085 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NRP2O60462 931 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DCNP07585 359 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RNH1P13489 461 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PBX2P40425 430 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SCTRP47872 440 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC6A9P48067 706 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 AFF3P51826 1226 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 STC1P52823 247 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CLRN1P58418 232 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 E2F1Q01094 437 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 HNRNPA1L2Q32P51 320 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ADGRD1Q6QNK2 874 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 C15orf39Q6ZRI6 1047 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM151BQ8IW70 566 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR52E4Q8NGH9 312 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR6N1Q8NGY5 312 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 COQ7Q99807 217 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PBX4Q9BYU1 374 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DERL2Q9GZP9 239 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PTRH2Q9Y3E5 179 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MAGEA13PA6NCF6 341 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF860A6NHJ4 632 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FAM155AB1AL88 458 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 G3V2T6 193 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TP73O15350 636 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PAPSS2O95340 614 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CHRM1P11229 460 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 ENDOUP21128 410 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TAS2R39P59534 338 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 DSTNP60981 165 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SLC25A3Q00325 362 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 LRP8Q14114 963 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 IRF4Q15306 451 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PDCD4Q53EL6 469 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM31Q5JXX7 168 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RAET1LQ5VY80 246 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 REP15Q6BDI9 236 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 IZUMO2Q6UXV1 221 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 UNC5DQ6UXZ4 953 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms