RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 IGFL3Q6UXB1 125 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 COX15Q7KZN9 410 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 PIWIL4Q7Z3Z4 852 aaKnown RBP8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 C17orf64Q86WR6 236 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CAMKVQ8NCB2 501 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 STT3BQ8TCJ2 826 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 LINGO1Q96FE5 620 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CFAP36Q96G28 342 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 VPS39Q96JC1 886 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 PDLIM2Q96JY6 352 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 AGAP4Q96P64 663 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC30A3Q99726 388 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 LHPPQ9H008 270 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC22A11Q9NSA0 550 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 ABCF3Q9NUQ8 709 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 RIC8BQ9NVN3 520 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 GALPQ9UBC7 116 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CTSFQ9UBX1 484 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 C3orf18Q9UK00 162 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 CHMP2BQ9UQN3 213 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 B3GNT3Q9Y2A9 372 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 MED16Q9Y2X0 877 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 HS3ST3B1Q9Y662 390 aa8.66□□□□□ -1.02
SNORD88A-201ENST00000408314 BSNQ9UPA5 3926 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ANKRD12Q6UB98 2062 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 IGLV3-12A0A075B6K2 115 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 KCNE1BA0A087WTH5 132 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 LOC105369274A0A096LPK9 316 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 LOC102723532A0A0G2JNH3 316 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 KRT87PA6NCN2 255 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 FAM187AA6NFU0 413 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 H0YIG0 161 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 CNOT3O75175 753 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 SEC31AO94979 1220 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 HEXBP07686 556 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 UQCRHP07919 91 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC35G6P0C7Q6 338 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ELK3P41970 407 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 OR1D4P47884 311 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ITGA8P53708 1063 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC12A2P55011 1212 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MLLT10P55197 1068 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 KLC1Q07866 573 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MGAT5Q09328 741 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 IGFBP7Q16270 282 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 STEAP4Q687X5 459 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 DUPD1Q68J44 220 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 FBXO42Q6P3S6 717 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 AGTRAPQ6RW13 159 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 LCTLQ6UWM7 567 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 CYHR1Q6ZMK1 362 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MAATS1Q7Z4T9 603 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC26A11Q86WA9 606 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 CREG2Q8IUH2 290 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 OR4N4Q8N0Y3 316 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 AGGF1Q8N302 714 aaeCLIP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 NKAPQ8N5F7 415 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 METTL27Q8N6F8 245 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ANKRD7Q92527 254 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 CDKL2Q92772 493 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MMABQ96EY8 250 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 C10orf90Q96M02 699 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 OR2A5Q96R48 311 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 NDNQ99608 321 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 WDR77Q9BQA1 342 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 YIPF2Q9BWQ6 316 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 TGIF2Q9GZN2 237 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 ARL15Q9NXU5 204 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 STOX2Q9P2F5 926 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MAP10Q9P2G4 905 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 TXNDC16Q9P2K2 825 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 TRPC4Q9UBN4 977 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 C19orf25Q9UFG5 118 aaPredicted RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 RUVBL1Q9Y265 456 aaKnown RBP8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 VWA7Q9Y334 891 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MAU2Q9Y6X3 613 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 NUP210LQ5VU65 1888 aa8.65□□□□□ -1.02
SNORD88A-201ENST00000408314 MED13Q9UHV7 2174 aa8.65□□□□□ -1.03
SNORD88A-201ENST00000408314 PTPN13Q12923 2485 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 NSG1A0A0A6YYJ2 146 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 IGKV1-8A0A0C4DH67 115 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 H7BY64 318 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 SOCS6O14544 535 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 HAT1O14929 419 aa8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 EIF3HO15372 352 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNORD88A-201ENST00000408314 TTI1O43156 1089 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms