RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NDUFAF2Q8N183 169 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 GPATCH11Q8N954 259 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR13C3Q8NGS6 347 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 ST7LQ8TDW4 575 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SEPT1Q8WYJ6 367 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SNX21Q969T3 373 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 PGM2Q96G03 612 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 RBM41Q96IZ5 413 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 MAP3K3Q99759 626 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF559Q9BR84 538 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC39A8Q9C0K1 460 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC52A3Q9NQ40 469 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 DNAJC17Q9NVM6 304 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 FAM118AQ9NWS6 357 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 NOCTQ9UK39 431 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 NSG2Q9Y328 171 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SMCHD1A6NHR9 2005 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 STK36Q9NRP7 1315 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 LRRD1A4D1F6 860 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 BMPR1BO00238 502 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ACSL4O60488 711 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 IGLV2-11P01706 119 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 APOHP02749 345 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 GPIP06744 558 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SBK2P0C263 348 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 UROSP10746 265 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 GOT1P17174 413 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SP100P23497 879 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 PIK3R1P27986 724 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ALDH4A1P30038 563 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 CDR2Q01850 454 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 CACNG1Q06432 222 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SULT2A1Q06520 285 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 TAF13Q15543 124 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 TWISTNBQ3B726 338 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 RUSC1-AS1Q66K80 236 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 UGT3A1Q6NUS8 523 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 TMEM207Q6UWW9 146 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 MEX3DQ86XN8 651 aaKnown RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 UNC45BQ8IWX7 931 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 TDHQ8IZJ6 230 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 CLYBLQ8N0X4 340 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 C10orf53Q8N6V4 93 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SMYD1Q8NB12 490 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SPC24Q8NBT2 197 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 NCOA7Q8NI08 942 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 AFAP1L1Q8TED9 768 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 SAP25Q8TEE9 199 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF524Q96C55 264 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 AK8Q96MA6 479 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 CTAGE1Q96RT6 745 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 EPYCQ99645 322 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ACAT2Q9BWD1 397 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF350Q9GZX5 532 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 MMP28Q9H239 520 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ACTL8Q9H568 366 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRPV4Q9HBA0 871 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF334Q9HCZ1 680 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 VPS18Q9P253 973 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 GPR132Q9UNW8 380 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 KCNJ14Q9UNX9 436 aa3.5□□□□□ -1.85
HMGB1P17-201ENST00000403495 IGHV4-61A0A0C4DH41 118 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 CRCPO75575 148 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 GLCEO94923 617 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 CAVIN2O95810 425 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 IGHV4-59P01825 116 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ATP1B1P05026 303 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 CA6P23280 308 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 SFTPDP35247 375 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 FRKP42685 505 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 DNA2P51530 1060 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 YBEYP58557 167 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 UBXN1Q04323 297 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 IL10RBQ08334 325 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 OPCMLQ14982 345 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZRSR1Q15695 479 aaKnown RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 GTDC1Q4AE62 458 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF542PQ5EBM4 170 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 C20orf194Q5TEA3 1177 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 PRAMEF8Q5VWM4 474 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 PM20D1Q6GTS8 502 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF770Q6IQ21 691 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 SIGLEC15Q6ZMC9 328 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 MEX3BQ6ZN04 569 aaKnown RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR7A2PQ8NGA2 310 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR2T11Q8NH01 316 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 HPSE2Q8WWQ2 592 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 FAM46BQ96A09 425 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 AP2M1Q96CW1 435 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 C4orf45Q96LM5 186 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 INPP4AQ96PE3 977 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 NEDD4LQ96PU5 975 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 OSBPL8Q9BZF1 889 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms