RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PLEKHA8Q96JA3 519 aa13.09□□□□□ -0.31
SIRPA-203ENST00000400068 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
SIRPA-203ENST00000400068 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
SIRPA-203ENST00000400068 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 AASSQ9UDR5 926 aa13.09□□□□□ -0.31
SIRPA-203ENST00000400068 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
SIRPA-203ENST00000400068 SAMD4AQ9UPU9 718 aaKnown RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 RUVBL1Q9Y265 456 aaKnown RBP13.09□□□□□ -0.31
SIRPA-203ENST00000400068 A0A1B0GTW7 788 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ABLIM3O94929 683 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 SCELO95171 688 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 B3GALT4O96024 378 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 CHRM5P08912 532 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ATP4BP51164 291 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 CLCN7P51798 805 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 AKR1D1P51857 326 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ITGADQ13349 1161 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 MAL2Q969L2 176 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 FBXO10Q9UK96 956 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 SPEF1Q9Y4P9 236 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ANKRD33BA6NCL7 494 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 E7EQ34 232 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 VNN2O95498 520 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ANGPTL1O95841 491 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 MAGP20916 626 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 PRKACBP22694 351 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 GDI1P31150 447 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 OR52E8Q6IFG1 317 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 PMM1Q92871 262 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 VPS35Q96QK1 796 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 RAD18Q9NS91 495 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 FBXW2Q9UKT8 454 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 TPRKBQ9Y3C4 175 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 PTPRFP10586 1907 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 FABP3P05413 133 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF805Q5CZA5 627 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 VTCN1Q7Z7D3 282 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-203ENST00000400068 TPT1P8Q9HAU6 139 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 C8orf4Q9NR00 106 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.32
SIRPA-203ENST00000400068 GSAPA4D1B5 854 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PLOD2O00469 737 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 IFNA14P01570 189 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 CEBPBP17676 345 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 IRS1P35568 1242 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 TAS2R50P59544 299 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 DCTN2Q13561 401 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 NFE2L1Q14494 772 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 SBSNQ6UWP8 590 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 LRRC70Q7Z2Q7 622 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 VN1R3Q9BXE9 311 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RHCGQ9UBD6 479 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 SLC28A2O43868 658 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 OR10H3O60404 316 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 EEDO75530 441 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 TIMP1P01033 207 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 CR2P20023 1033 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 ENDOUP21128 410 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PTNP21246 168 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 LHCGRP22888 699 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 GPAT3Q53EU6 434 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RAD9AQ99638 391 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RBM4Q9BWF3 364 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 SYNDIG1Q9H7V2 258 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 XPNPEP2O43895 674 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 ERN1O75460 977 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 ASLP04424 464 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PPP2R1BP30154 601 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PTGER1P34995 402 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 AP1S2P56377 157 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RCAN2Q14206 197 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 FAM46CQ5VWP2 391 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 HEATR4Q86WZ0 1026 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF683Q8IZ20 524 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 PELI3Q8N2H9 469 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 CELF5Q8N6W0 485 aaKnown RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 RAD51AP1Q96B01 352 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF641Q96N77 438 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-203ENST00000400068 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms