RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ABATP80404 500 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 EEF1A2Q05639 463 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 PRDX1Q06830 199 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 PCOLCEQ15113 449 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 RNF187Q5TA31 235 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 LRRC8BQ6P9F7 803 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 DTWD1Q8N5C7 304 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 TCF12Q99081 682 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 EBNA1BP2Q99848 306 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 MESP1Q9BRJ9 268 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 IL22Q9GZX6 179 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 GPAMQ9HCL2 828 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 RAB6BQ9NRW1 208 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 MKL2Q9ULH7 1088 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 RUVBL1Q9Y265 456 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 NFS1Q9Y697 457 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 H0YIG0 161 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 TTI1O43156 1089 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 APRTP07741 180 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 ITGAMP11215 1152 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 AVPR1BP47901 424 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF33BQ06732 778 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 PLAG1Q6DJT9 500 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 MRNIPQ6NTE8 343 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 C4orf22Q6V702 233 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 EID3Q8N140 333 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 TAB3Q8N5C8 712 aaPredicted RBP16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 AMER3Q8N944 861 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 MAGED4Q96JG8 741 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 OR2A5Q96R48 311 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 CHRAC1Q9NRG0 131 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 PAK5Q9P286 719 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF148Q9UQR1 794 aa16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 R3HDM2Q9Y2K5 976 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-202ENST00000396521 SETD2Q9BYW2 2564 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 MYO1CO00159 1063 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 IFNB1P01574 187 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ESR1P03372 595 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 GRIA1P42261 906 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 BDKRB1P46663 353 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 GBX1Q14549 363 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 CCSMST1Q4G0I0 132 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF766Q5HY98 468 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ARMC3Q5W041 872 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF425Q6IV72 752 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 H3F3CQ6NXT2 135 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 LDB1Q86U70 411 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 PAQR7Q86WK9 346 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 HORMAD2Q8N7B1 307 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 MCOLN3Q8TDD5 553 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 C14orf79Q96F83 325 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ACAT2Q9BWD1 397 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 TRIM8Q9BZR9 551 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 EIF2B3Q9NR50 452 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 TREX1Q9NSU2 369 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 MARCH4Q9P2E8 410 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 DRG1Q9Y295 367 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF835Q9Y2P0 537 aa16.59■□□□□ 0.25
EXOSC3-202ENST00000396521 CSMD2Q7Z408 3487 aa16.58■□□□□ 0.25
EXOSC3-202ENST00000396521 HIVEP1P15822 2718 aa16.58■□□□□ 0.25
EXOSC3-202ENST00000396521 LIASO43766 372 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 PSIP1O75475 530 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 CATP04040 527 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 HRH2P25021 359 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 NPY2RP49146 381 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 AGTR2P50052 363 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 EIF3BP55884 814 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 PTK6Q13882 451 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 EXT1Q16394 746 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 ACER2Q5QJU3 275 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 ICE2Q659A1 982 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 FAAH2Q6GMR7 532 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 Q6ZPB1 254 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 SPPL2CQ8IUH8 684 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 ZC3H7AQ8IWR0 971 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 ARHGEF39Q8N4T4 335 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 CCDC89Q8N998 374 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 MTFMTQ96DP5 389 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 GPR137Q96N19 417 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 SPOCK3Q9BQ16 436 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 FAM129AQ9BZQ8 928 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 LACRTQ9GZZ8 138 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 BFARQ9NZS9 450 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 STOX2Q9P2F5 926 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 CELSR1Q9NYQ6 3014 aa16.58■□□□□ 0.24
EXOSC3-202ENST00000396521 SOWAHDA6NJG2 315 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 FOXS1O43638 330 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 CLDN14O95500 239 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 F10P00742 488 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 CD46P15529 392 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 KIF5AQ12840 1032 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 FASTKQ14296 549 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 MEP1AQ16819 746 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 HKDC1Q2TB90 917 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 NEK10Q6ZWH5 1172 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 CPEB2Q7Z5Q1 589 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 PCGF5Q86SE9 256 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms