RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HPS6Q86YV9 775 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 CREG2Q8IUH2 290 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 SHISA5Q8N114 240 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 FAM26EQ8N5C1 309 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 AMER2Q8N7J2 671 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 GALNT11Q8NCW6 608 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 OR11G2Q8NGC1 345 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 MIEF2Q96C03 454 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 C8orf44Q96CB5 159 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 PRAP1Q96NZ9 151 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 WDR83Q9BRX9 315 aaKnown RBP17.43■□□□□ 0.38
FXN-203ENST00000396366 ZNF282Q9UDV7 671 aaPredicted RBP17.43■□□□□ 0.38
FXN-203ENST00000396366 TRMT6Q9UJA5 497 aaKnown RBP17.43■□□□□ 0.38
FXN-203ENST00000396366 SH2B3Q9UQQ2 575 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 PDE10AQ9Y233 779 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 CSAG2Q9Y5P2 127 aa17.43■□□□□ 0.38
FXN-203ENST00000396366 USP9YO00507 2555 aaPredicted RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 ZNF839A8K0R7 811 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 TCP11X1B4DZS4 312 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 FBLP22087 321 aaKnown RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 OCA2Q04671 838 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 NAA25Q14CX7 972 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 PCGF5Q86SE9 256 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 ARHGEF39Q8N4T4 335 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 CISD2Q8N5K1 135 aaKnown RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 NACC2Q96BF6 587 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 CFAP36Q96G28 342 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 MACROD1Q9BQ69 325 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 CRB3Q9BUF7 120 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 YIPF2Q9BWQ6 316 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 SEMA3GQ9NS98 782 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 NXT1Q9UKK6 140 aaKnown RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 B3GNT3Q9Y2A9 372 aa17.42■□□□□ 0.38
FXN-203ENST00000396366 MRPS2Q9Y399 296 aaKnown RBP17.42■□□□□ 0.38
FXN-203ENST00000396366 MAST4O15021 2626 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 A0A0A6YYC8 382 aaPredicted RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 I3L1I5 382 aaPredicted RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 FOXS1O43638 330 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 CCNDBP1O95273 360 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 ALPPP05187 535 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 EZRP15311 586 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 ELK3P41970 407 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 GNG11P61952 73 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 ABATP80404 500 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 MRPL49Q13405 166 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 HIF1AQ16665 826 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 SYT16Q17RD7 645 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 TUBB8Q3ZCM7 444 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 TRMT10BQ6PF06 316 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 CNTN4Q8IWV2 1026 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 AMER3Q8N944 861 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 RERGQ96A58 199 aaPredicted RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 ALKBH8Q96BT7 664 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 SNRNP40Q96DI7 357 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 CERS2Q96G23 380 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 TRIM51Q9BSJ1 452 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 ATG10Q9H0Y0 220 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 PPANQ9NQ55 473 aaKnown RBP17.41■□□□□ 0.38
FXN-203ENST00000396366 TRPC4Q9UBN4 977 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 C3orf18Q9UK00 162 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 CHMP2BQ9UQN3 213 aa17.41■□□□□ 0.38
FXN-203ENST00000396366 IGLV3-12A0A075B6K2 115 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 TTC4O95801 387 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 SLC26A3P40879 764 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 EMP3P54852 163 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 TBPL1P62380 186 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 DR1Q01658 176 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 PHKG1Q16816 387 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 ZXDCQ2QGD7 858 aaPredicted RBP17.4■□□□□ 0.38
FXN-203ENST00000396366 TEDDM1Q5T9Z0 273 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 ATG9BQ674R7 924 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 FAAH2Q6GMR7 532 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 CUZD1Q86UP6 607 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 ZADH2Q8N4Q0 377 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 MCOLN3Q8TDD5 553 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 LINGO1Q96FE5 620 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 THOC3Q96J01 351 aaKnown RBP17.4■□□□□ 0.38
FXN-203ENST00000396366 CCDC138Q96M89 665 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 ZNF160Q9HCG1 818 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 ASF1BQ9NVP2 202 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 TAS2R13Q9NYV9 303 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 PYCARDQ9ULZ3 195 aa17.4■□□□□ 0.38
FXN-203ENST00000396366 EIF3FO00303 357 aaPredicted RBP17.39■□□□□ 0.37
FXN-203ENST00000396366 FANCGO15287 622 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 TP73O15350 636 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 TTI1O43156 1089 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 TSPAN12O95859 305 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 EFNA3P52797 238 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 ITGA8P53708 1063 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 MRPS25P82663 173 aaKnown RBP17.39■□□□□ 0.37
FXN-203ENST00000396366 MAT1AQ00266 395 aaKnown RBP17.39■□□□□ 0.37
FXN-203ENST00000396366 RELAQ04206 551 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 DSG2Q14126 1118 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 EIF2S3LQ2VIR3 472 aaKnown RBP17.39■□□□□ 0.37
FXN-203ENST00000396366 CRB2Q5IJ48 1285 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 UGT3A1Q6NUS8 523 aa17.39■□□□□ 0.37
FXN-203ENST00000396366 HIBCHQ6NVY1 386 aaPredicted RBP17.39■□□□□ 0.37
FXN-203ENST00000396366 AGTRAPQ6RW13 159 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms