RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RNF31Q96EP0 1072 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 ZFYVE21Q9BQ24 234 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SELENOSQ9BQE4 189 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CAPS2Q9BXY5 557 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 ULBP3Q9BZM4 244 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SPRTNQ9H040 489 aaPredicted RBP18.4■□□□□ 0.54
HOXA9-202ENST00000396345 IRAK4Q9NWZ3 460 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 ACSL6Q9UKU0 697 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SPTBP11277 2137 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TPRP12270 2363 aaKnown RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 E7EQ34 232 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 COPEO14579 308 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 TLX3O43711 291 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 SRPX2O60687 465 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 SCRG1O75711 98 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 STK17BO94768 372 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 KIAA0754O94854 1291 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 CTSBP07858 339 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 ZNF28P17035 718 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 GNAZP19086 355 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 CRHR1P34998 444 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 FRMPD2BQ6IN97 320 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 NXPE4Q6UWF7 544 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 TMEM151AQ8N4L1 468 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 PTGR2Q8N8N7 351 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 ABHD11Q8NFV4 315 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 SNIP1Q8TAD8 396 aaKnown RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 ZCCHC14Q8WYQ9 949 aaKnown RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 SPRY4Q9C004 299 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 PELI2Q9HAT8 420 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 ARGLU1Q9NWB6 273 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 GPRC5BQ9NZH0 403 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 OPTCQ9UBM4 332 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 TMEM184BQ9Y519 407 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 ASB1Q9Y576 335 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 TNPO3Q9Y5L0 923 aaKnown RBP18.39■□□□□ 0.53
HOXA9-202ENST00000396345 WDFY3Q8IZQ1 3526 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 APC2O95996 2303 aa18.39■□□□□ 0.53
HOXA9-202ENST00000396345 SDK2Q58EX2 2172 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 LOC105369274A0A096LPK9 316 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 LOC102723532A0A0G2JNH3 316 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 STMND1H3BQB6 276 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 K7EPI3 171 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 CLGNO14967 610 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 RGS16O15492 202 aaPredicted RBP18.38■□□□□ 0.53
HOXA9-202ENST00000396345 SBK3P0C264 359 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 TAC1P20366 129 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 GRK3P35626 688 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 VSX2P58304 361 aaPredicted RBP18.38■□□□□ 0.53
HOXA9-202ENST00000396345 RPS15AP62244 130 aaKnown RBP18.38■□□□□ 0.53
HOXA9-202ENST00000396345 PDK4Q16654 411 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 TCTE1Q5JU00 501 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 CATSPEREQ5SY80 951 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 PRAMEF17Q5VTA0 474 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 TLDC1Q6P9B6 456 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 TMPRSS11BQ86T26 416 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 PLD3Q8IV08 490 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 SRRM1Q8IYB3 904 aaKnown RBP18.38■□□□□ 0.53
HOXA9-202ENST00000396345 OR4N4Q8N0Y3 316 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 OR4K1Q8NGD4 311 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 PHF21BQ96EK2 531 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 PCDHB3Q9Y5E6 796 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 AHCTF1Q8WYP5 2266 aa18.38■□□□□ 0.53
HOXA9-202ENST00000396345 MDC1Q14676 2089 aaKnown RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ACACAQ13085 2346 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 FEZF1A0PJY2 475 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 H0YGG7 62 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 H3BMH7 237 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ZNF749O43361 778 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 DLGAP3O95886 979 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 NTRK1P04629 796 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 EIF2S1P05198 315 aaKnown RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ARF3P61204 181 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 MEF2AQ02078 507 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 PCBP2Q15366 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 WASHC2DQ5SRD0 308 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ZNF655Q8N720 491 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 KDF1Q8NAX2 398 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ZNF248Q8NDW4 579 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 RERGQ96A58 199 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ZNF285Q96NJ3 590 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 OR2A5Q96R48 311 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ACTR5Q9H9F9 607 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-202ENST00000396345 EMCNQ9ULC0 261 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ANGPTL3Q9Y5C1 460 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 AP1M2Q9Y6Q5 423 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 ASPMQ8IZT6 3477 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 EPG5Q9HCE0 2579 aa18.37■□□□□ 0.53
HOXA9-202ENST00000396345 LRRC14BA6NHZ5 514 aa18.36■□□□□ 0.53
HOXA9-202ENST00000396345 STX16-NPEPL1H3BU86 382 aa18.36■□□□□ 0.53
HOXA9-202ENST00000396345 STX16O14662 325 aa18.36■□□□□ 0.53
HOXA9-202ENST00000396345 ZSCAN9O15535 394 aaPredicted RBP18.36■□□□□ 0.53
HOXA9-202ENST00000396345 CPNE3O75131 537 aaKnown RBP18.36■□□□□ 0.53
HOXA9-202ENST00000396345 H2AFYO75367 372 aaKnown RBP18.36■□□□□ 0.53
HOXA9-202ENST00000396345 SIX3O95343 332 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms