RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PPM1DO15297 605 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 GALR2O43603 387 aaPredicted RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 ALDOCP09972 364 aaKnown RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 ERVK-8P63133 956 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 HLA-BQ31612 363 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 C14orf28Q4W4Y0 310 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 C6orf132Q5T0Z8 1188 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 C10orf62Q5T681 223 aaPredicted RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 TMIGD1Q6UXZ0 262 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 C17orf82Q86X59 251 aaPredicted RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 RNF175Q8N4F7 328 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 CPSF7Q8N684 471 aaKnown RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 ZNF740Q8NDX6 193 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 OR4K1Q8NGD4 311 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 HUS1BQ8NHY5 278 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 TBC1D10AQ9BXI6 508 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 ZNF385DQ9H6B1 395 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 C11orf16Q9NQ32 467 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 MRGBPQ9NV56 204 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 ACTR10Q9NZ32 417 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 COPG1Q9Y678 874 aaKnown RBP19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 CAPN7Q9Y6W3 813 aa19.64■□□□□ 0.73
VCPKMT-202ENST00000395860 CAPN14A8MX76 684 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 PATE3B3GLJ2 98 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 HSD3B1P14060 373 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 HSD3B2P26439 372 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 EPHA8P29322 1005 aaPredicted RBP19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 PHEXP78562 749 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 REEP5Q00765 189 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 SQLEQ14534 574 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 RBBP5Q15291 538 aaKnown RBP19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 TRIM61Q5EBN2 209 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 ADNP2Q6IQ32 1131 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 OOSP2Q86WS3 158 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 TREML1Q86YW5 311 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 GPR156Q8NFN8 814 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 PITHD1Q9GZP4 211 aaPredicted RBP19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 BRF2Q9HAW0 419 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 LRTM1Q9HBL6 345 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 CAPN10Q9HC96 672 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC6A20Q9NP91 592 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 TMEM184CQ9NVA4 438 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 HRASLS2Q9NWW9 162 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC6A14Q9UN76 642 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 ENTPD2Q9Y5L3 495 aa19.63■□□□□ 0.73
VCPKMT-202ENST00000395860 IGKV1-8A0A0C4DH67 115 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 C2orf74A8MZ97 194 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 DFNA5O60443 496 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 SEC22BO75396 215 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 RSL1D1O76021 490 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 HRH2P25021 359 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 STX1BP61266 288 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 CSNK1G2P78368 415 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 BNIP1Q12981 228 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 KLF10Q13118 480 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 KRT72Q14CN4 511 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 KIAA1614Q5VZ46 1190 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 KYQ8NBH2 561 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 OR2A14Q96R47 310 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC38A3Q99624 504 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 DPH7Q9BTV6 452 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 C1orf50Q9BV19 199 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 TWSG1Q9GZX9 223 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 GAREM1Q9H706 876 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 UCK1Q9HA47 277 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 ARL8BQ9NVJ2 186 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 C1orf109Q9NX04 203 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC12A4Q9UP95 1085 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 MAGEB17A8MXT2 336 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 CBX6O95503 412 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 UGT2B7P16662 529 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 ADSLP30566 484 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 GRK3P35626 688 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 RPL38P63173 70 aaKnown RBP19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 MAD2L1Q13257 205 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 ARMC6Q6NXE6 501 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC23A3Q6PIS1 610 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 TSC22D4Q9Y3Q8 395 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 PCDH15Q96QU1 1955 aa19.62■□□□□ 0.73
VCPKMT-202ENST00000395860 FEZF1A0PJY2 475 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 OR5K3A6NET4 321 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC22A2O15244 555 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 YKT6O15498 198 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 IDO1P14902 403 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 PRPH2P23942 346 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 ATP4BP51164 291 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 RPS13P62277 151 aaKnown RBP19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 EMX2Q04743 252 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 RPS6KA2Q15349 733 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 GSTA3Q16772 222 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 SMU1Q2TAY7 513 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 RFTN2Q52LD8 501 aaPredicted RBP19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 GATAD2AQ86YP4 633 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 ARL10Q8N8L6 244 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 FLVCR1-AS1Q8TAF5 88 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 NSL1Q96IY1 281 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 TUBB6Q9BUF5 446 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 NT5DC2Q9H857 520 aa19.61■□□□□ 0.73
VCPKMT-202ENST00000395860 SNX7Q9UNH6 387 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms