RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 NETO1Q8TDF5 533 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 TESCQ96BS2 214 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 C11orf24Q96F05 449 aaPredicted RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 CPPED1Q9BRF8 314 aaPredicted RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 MKRN2Q9H000 416 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 OR51B5Q9H339 312 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 NTN4Q9HB63 628 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CLEC1BQ9P126 229 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 ZFR2Q9UPR6 939 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 TMED5Q9Y3A6 229 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 SERTM1A2A2V5 107 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 K7EQS6 105 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 SCN2BO60939 215 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 COX7A2P14406 83 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 HOXB9P17482 250 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 MAPK1P28482 360 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 KIR3DL1P43629 444 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 LRIF1Q5T3J3 769 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 GOLM1Q8NBJ4 401 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 MRPL38Q96DV4 380 aaKnown RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 ITCHQ96J02 903 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 LINC00615Q96LM1 132 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 HHIPQ96QV1 700 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 PCDHGA11Q9Y5H2 935 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 A0A096LPI6 279 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 GABRR3A8MPY1 467 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 NPIPB8E9PQR5 432 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 CXCR6O00574 342 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ERN1O75460 977 aaKnown RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 ANXA4P09525 319 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 UMPSP11172 480 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 HSPA13P48723 471 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 C16orf72Q14CZ0 275 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ATP6AP1Q15904 470 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ITPRIPL2Q3MIP1 535 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 OTUD3Q5T2D3 398 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 FAM46CQ5VWP2 391 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ZNF621Q6ZSS3 439 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 GALNT10Q86SR1 603 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 SATL1Q86VE3 508 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 AMZ2Q86W34 360 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 TBC1D21Q8IYX1 336 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 ST13P4Q8IZP2 240 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 MAGEE2Q8TD90 523 aaPredicted RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 CSGALNACT1Q8TDX6 532 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 FCRL1Q96LA6 429 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 GBP5Q96PP8 586 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 MYOCQ99972 504 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 TRMT61BQ9BVS5 477 aaKnown RBP14.54□□□□□ -0.08
GPC3-202ENST00000394299 OSBPL11Q9BXB4 747 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 MAN2B2Q9Y2E5 1009 aa14.54□□□□□ -0.08
GPC3-202ENST00000394299 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 C17orf113A0A1B0GUU1 675 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 VEGFDO43915 354 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 PRKD3O94806 890 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 OR6B1O95007 311 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 FAM58BPP0C7Q3 252 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 CDH1P12830 882 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 PNLIPRP1P54315 467 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 POLE2P56282 527 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 ANKRD34AQ69YU3 496 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 MED27Q6P2C8 311 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 GALNT13Q8IUC8 556 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 KLHDC8AQ8IYD2 350 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 MICU2Q8IYU8 434 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 HM13Q8TCT9 377 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 GANCQ8TET4 914 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 TFGQ92734 400 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 FAM162AQ96A26 154 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 SH3KBP1Q96B97 665 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 FAM120BQ96EK7 910 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 PANX1Q96RD7 426 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 SGPP1Q9BX95 441 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 LMAN2LQ9H0V9 348 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 RSPH9Q9H1X1 276 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 RMND5AQ9H871 391 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 MSRAQ9UJ68 235 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 RUVBL1Q9Y265 456 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 PLEKHM1Q9Y4G2 1056 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 UPK1AO00322 258 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 FPGTO14772 594 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 AP1G1O43747 822 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 LDLRP01130 860 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 C1GALT1C1LP0DN25 315 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 ZNF23P17027 643 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 PRPS1L1P21108 318 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 MAT2AP31153 395 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 CASP9P55211 416 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 MC1RQ01726 317 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 INTS11Q5TA45 600 aaKnown RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 CHST15Q7LFX5 561 aaPredicted RBP14.53□□□□□ -0.08
GPC3-202ENST00000394299 CARM1Q86X55 608 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 TMEM132CQ8N3T6 1108 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 WDR48Q8TAF3 677 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 CHTF18Q8WVB6 975 aa14.53□□□□□ -0.08
GPC3-202ENST00000394299 TFAP2CQ92754 450 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms