RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 UTP23Q9BRU9 249 aaKnown RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 TUBB6Q9BUF5 446 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 ARNT2Q9HBZ2 717 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 COQ3Q9NZJ6 369 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 TEKT2Q9UIF3 430 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 R3HDM2Q9Y2K5 976 aaKnown RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 FN1P02751 2386 aaKnown RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ASPDHA6ND91 283 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 PRRG2O14669 202 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 FOXS1O43638 330 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 AKR1B10O60218 316 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 GPC4O75487 556 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ZRANB2O95218 330 aaKnown RBP eCLIP11.15□□□□□ -0.62
SOD1-202ENST00000389995 TSPAN12O95859 305 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ICAM2P13598 275 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 SLC1A1P43005 524 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 PPP2R2AP63151 447 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 OC90Q02509 493 aaPredicted RBP11.15□□□□□ -0.62
SOD1-202ENST00000389995 TFF3Q07654 80 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 SEMA3AQ14563 771 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 CEBPEQ15744 281 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 BBS12Q6ZW61 710 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 LDB1Q86U70 411 aaPredicted RBP11.15□□□□□ -0.62
SOD1-202ENST00000389995 GHDCQ8N2G8 530 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 CPSF7Q8N684 471 aaKnown RBP11.15□□□□□ -0.62
SOD1-202ENST00000389995 CSNK1A1LQ8N752 337 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 STYXQ8WUJ0 223 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 KRT35Q92764 455 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 CHP1Q99653 195 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 SMR3AQ99954 134 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ZFYVE21Q9BQ24 234 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 DPH7Q9BTV6 452 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 KCNK13Q9HB14 408 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 MKKSQ9NPJ1 570 aaPredicted RBP11.15□□□□□ -0.62
SOD1-202ENST00000389995 C14orf105Q9NVL8 296 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 SLC2A6Q9UGQ3 507 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.62
SOD1-202ENST00000389995 CDC14AQ9UNH5 594 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ARHGAP21Q5T5U3 1957 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 ZANQ9Y493 2812 aa11.15□□□□□ -0.62
SOD1-202ENST00000389995 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 OR2A25A4D2G3 310 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 TMEM200CA6NKL6 621 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 QSOX1O00391 747 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 PSTPIP1O43586 416 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 TOXO94900 526 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 MLYCDO95822 493 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 APOC2P02655 101 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 RPN2P04844 631 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 TPOP07202 933 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 SP1P08047 785 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 ANXA5P08758 320 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CD46P15529 392 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 RFC3P40938 356 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 NR0B1P51843 470 aaKnown RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 EIF3EP60228 445 aaKnown RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 MYBPHQ13203 477 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 MAPKAPK3Q16644 382 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 ZNF468Q5VIY5 522 aaPredicted RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 H3F3CQ6NXT2 135 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 UNC5DQ6UXZ4 953 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 CD163Q86VB7 1156 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CCDC71Q8IV32 467 aaPredicted RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 RHOT2Q8IXI1 618 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 DMRTC2Q8IXT2 367 aaPredicted RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 SKA2Q8WVK7 121 aaPredicted RBP11.14□□□□□ -0.63
SOD1-202ENST00000389995 ZNF354BQ96LW1 612 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 SPATA13Q96N96 652 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 FOXC2Q99958 501 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 C19orf43Q9BQ61 176 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 TGIF2Q9GZN2 237 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 VN1R1Q9GZP7 353 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 CXXC4Q9H2H0 198 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 ABHD10Q9NUJ1 306 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 RNF6Q9Y252 685 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 ALG6Q9Y672 507 aa11.14□□□□□ -0.63
SOD1-202ENST00000389995 A0A1B0GTH9 108 aa11.13□□□□□ -0.63
SOD1-202ENST00000389995 FAM221AA4D161 298 aa11.13□□□□□ -0.63
SOD1-202ENST00000389995 MROH6A6NGR9 719 aa11.13□□□□□ -0.63
SOD1-202ENST00000389995 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
SOD1-202ENST00000389995 P2RX6O15547 441 aa11.13□□□□□ -0.63
SOD1-202ENST00000389995 MFAP3LO75121 409 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms