RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CPEB1Q9BZB8 566 aaKnown RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 UTS2RQ9UKP6 389 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 CLCA3PQ9Y6N3 262 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 E7ENX8 843 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SERPINA1P01009 418 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ENGP17813 658 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 XRCC1P18887 633 aaPredicted RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 MASP1P48740 699 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 EMX2Q04743 252 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 DOC2AQ14183 400 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 LPAL2Q16609 132 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ARMC3Q5W041 872 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 KIAA1161Q6NSJ0 714 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ZNF761Q86XN6 746 aaPredicted RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 TDHQ8IZJ6 230 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SLC22A2O15244 555 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 DNAJA2O60884 412 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 PGM3O95394 542 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 HNRNPA2B1P22626 353 aaKnown RBP12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 ID2Q02363 134 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 FOLH1Q04609 750 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 LRTOMTQ8WZ04 291 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF689Q96CS4 500 aaPredicted RBP12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 TMEM74Q96NL1 305 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 EPS8L2Q9H6S3 715 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 ZBTB26Q9HCK0 441 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 PNO1Q9NRX1 252 aaKnown RBP12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 CDC14AQ9UNH5 594 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 WASF2Q9Y6W5 498 aa12.71□□□□□ -0.38
PTPRN2-202ENST00000389416 LINC00854A0A1B0GVQ3 168 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 SDHDO14521 159 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 OPN1SWP03999 348 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 FABP3P05413 133 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 KCNC3Q14003 757 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 GRB7Q14451 532 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 CBR4Q8N4T8 237 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 FAM47BQ8NA70 645 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 NUP205Q92621 2012 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 POP5Q969H6 163 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RNF31Q96EP0 1072 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 NDC1Q9BTX1 674 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 TMEM27Q9HBJ8 222 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 COPS7AQ9UBW8 275 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 WNK3Q9BYP7 1800 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 GPIP06744 558 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 CDH12P55289 794 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RABL3Q5HYI8 236 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 MACC1Q6ZN28 852 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RASGRP3Q8IV61 690 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF540Q8NDQ6 660 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 CD200R1Q8TD46 325 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 WBP2Q969T9 261 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 CHID1Q9BWS9 393 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RASSF1Q9NS23 344 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 DNAAF2Q9NVR5 837 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 PDE10AQ9Y233 779 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ATXN1LP0C7T5 689 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 POU2F1P14859 743 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF140P52738 457 aaPredicted RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 KLHL12Q53G59 568 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 CXorf57Q6NSI4 855 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 COMMD2Q86X83 199 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 COL21A1Q96P44 957 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RBCK1Q9BYM8 510 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 TREX1Q9NSU2 369 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 FZD4Q9ULV1 537 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 HS3ST2Q9Y278 367 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 TMED5Q9Y3A6 229 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 A0A1W2PP18 115 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ALG11Q2TAA5 492 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ABRAXAS1Q6UWZ7 409 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 VN1R2Q8NFZ6 395 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 TEX47Q8TBZ9 253 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 PTERQ96BW5 349 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 MKS1Q9NXB0 559 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 RIMKLBQ9ULI2 386 aa12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-202ENST00000389416 OR52A4PA6NMU1 304 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 WFS1O76024 890 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CTSCP53634 463 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 DYNC1I2Q13409 638 aaKnown RBP12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 NR1D2Q14995 579 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 RFX4Q33E94 735 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 METTL27Q8N6F8 245 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms