RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DRC3Q9H069 523 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 P2RY12Q9H244 342 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 RAB6BQ9NRW1 208 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 FAM114A2Q9NRY5 505 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 STMN3Q9NZ72 180 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
VCX3A-201ENST00000381089 RUVBL2Q9Y230 463 aaKnown RBP15.19■□□□□ 0.02
VCX3A-201ENST00000381089 RUVBL1Q9Y265 456 aaKnown RBP15.19■□□□□ 0.02
VCX3A-201ENST00000381089 PKDREJQ9NTG1 2253 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 LOC102723996A0A087X1L8 192 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 A0A1W2PPV9 198 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 H3BMM5 538 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 AP3B1O00203 1094 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 NRP2O60462 931 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 SNRPB2P08579 225 aaKnown RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 C8orf89P0DMQ9 161 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 ITGAMP11215 1152 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 EZRP15311 586 aaKnown RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 ATP5DP30049 168 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 HSD17B2P37059 387 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 GRIA1P42261 906 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 TSTA3Q13630 321 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 ARHGAP19Q14CB8 494 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 NDUFA9Q16795 377 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 RNF187Q5TA31 235 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 SDCCAG8Q86SQ7 713 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 OR9A1PQ8NGU1 263 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 MAGED4Q96JG8 741 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 LACRTQ9GZZ8 138 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 KCNF1Q9H3M0 494 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 CHRAC1Q9NRG0 131 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 PAK5Q9P286 719 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 MARCH4Q9P2E8 410 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 C19orf25Q9UFG5 118 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 MKL2Q9ULH7 1088 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 PACSIN2Q9UNF0 486 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-201ENST00000381089 FBN2P35556 2912 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 CPAMD8Q8IZJ3 1885 aa15.18■□□□□ 0.02
VCX3A-201ENST00000381089 F8P00451 2351 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 FFAR3O14843 346 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 GPR42O15529 346 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 SLC19A2O60779 497 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 CELA2AP08217 269 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 CYC1P08574 325 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 AGAP20933 346 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 MST1P26927 711 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 AVPR1BP47901 424 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 FASTKQ14296 549 aaKnown RBP15.17■□□□□ 0.02
VCX3A-201ENST00000381089 PCOLCEQ15113 449 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 HKDC1Q2TB90 917 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF766Q5HY98 468 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 MRNIPQ6NTE8 343 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 LRRC8BQ6P9F7 803 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 TMEM205Q6UW68 189 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 NEK10Q6ZWH5 1172 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 AMER3Q8N944 861 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 IL22Q9GZX6 179 aa15.17■□□□□ 0.02
VCX3A-201ENST00000381089 TSR3Q9UJK0 312 aaKnown RBP15.17■□□□□ 0.02
VCX3A-201ENST00000381089 A0A0U1RQJ8 604 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 KRT87PA6NCN2 255 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 A8MUI8 341 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 TTI1O43156 1089 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 LIASO43766 372 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 MATN4O95460 622 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 FTCDO95954 541 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 CATP04040 527 aaKnown RBP15.16■□□□□ 0.02
VCX3A-201ENST00000381089 ERGP11308 486 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 SSTR2P30874 369 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 SESN2P58004 480 aaPredicted RBP15.16■□□□□ 0.02
VCX3A-201ENST00000381089 KIF5AQ12840 1032 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 FAM53BQ14153 422 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 OASLQ15646 514 aaKnown RBP15.16■□□□□ 0.02
VCX3A-201ENST00000381089 MFSD4BQ5TF39 518 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 SUSD1Q6UWL2 747 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 ADCK2Q7Z695 626 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 PAQR7Q86WK9 346 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 MCOLN3Q8TDD5 553 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 ZNF354BQ96LW1 612 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
VCX3A-201ENST00000381089 BFARQ9NZS9 450 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 TAC3Q9UHF0 121 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 PCDHGB6Q9Y5F9 930 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 CSMD2Q7Z408 3487 aa15.16■□□□□ 0.02
VCX3A-201ENST00000381089 ADGRG4Q8IZF6 3080 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 A0A0A6YYC8 382 aaPredicted RBP15.15■□□□□ 0.02
VCX3A-201ENST00000381089 E5RI56 91 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 I3L1I5 382 aaPredicted RBP15.15■□□□□ 0.02
VCX3A-201ENST00000381089 MYO1CO00159 1063 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 ESR1P03372 595 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 CHRM3P20309 590 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 FMO4P31512 558 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 ABATP80404 500 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 RELAQ04206 551 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 PRDX1Q06830 199 aaKnown RBP15.15■□□□□ 0.02
VCX3A-201ENST00000381089 BTBD16Q32M84 506 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 KRTCAP3Q53RY4 240 aa15.15■□□□□ 0.02
VCX3A-201ENST00000381089 ICE2Q659A1 982 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms