RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ADCK2Q7Z695 626 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 AGGF1Q8N302 714 aaeCLIP18.25■□□□□ 0.51
CBWD3-204ENST00000377349 NAT8LQ8N9F0 302 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.25■□□□□ 0.51
CBWD3-204ENST00000377349 OR9A1PQ8NGU1 263 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 STT3BQ8TCJ2 826 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 C10orf90Q96M02 699 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 GPR21Q99679 349 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 STOX2Q9P2F5 926 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-204ENST00000377349 ZC3H7BQ9UGR2 993 aaKnown RBP18.25■□□□□ 0.51
CBWD3-204ENST00000377349 NEU2Q9Y3R4 380 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 GTF3C1Q12789 2109 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 AKAP9Q99996 3911 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 PDZD2O15018 2839 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 IGLV3-12A0A075B6K2 115 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ZCWPW2A0A1B0GU75 182 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 LRRTM2O43300 516 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 MATN4O95460 622 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 HPP00738 406 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ZGLP1P0C6A0 271 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CLCN7P51798 805 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ADARP55265 1226 aaKnown RBP18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CDC16Q13042 620 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 MFAP5Q13361 173 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 GBX1Q14549 363 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 TLR1Q15399 786 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 THEMIS2Q5TEJ8 643 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ATG9BQ674R7 924 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ISLR2Q6UXK2 745 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 KLHL7Q8IXQ5 586 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 PRSS58Q8IYP2 241 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CATSPER1Q8NEC5 780 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 GIMAP7Q8NHV1 300 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CALML6Q8TD86 181 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 PSMF1Q92530 271 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ANP32BQ92688 251 aaKnown RBP18.24■□□□□ 0.51
CBWD3-204ENST00000377349 C8orf44Q96CB5 159 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CNDP1Q96KN2 507 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 PKP4Q99569 1192 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 NDNQ99608 321 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 FAM167BQ9BTA0 163 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 DPH7Q9BTV6 452 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 CRB3Q9BUF7 120 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 EPS8L2Q9H6S3 715 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 ZNF304Q9HCX3 659 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 MRPS30Q9NP92 439 aaKnown RBP18.24■□□□□ 0.51
CBWD3-204ENST00000377349 TAC3Q9UHF0 121 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 OSGIN2Q9Y236 505 aa18.24■□□□□ 0.51
CBWD3-204ENST00000377349 OR2A25A4D2G3 310 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PNLIPRP1P54315 467 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PRTGQ2VWP7 1150 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 BBS9Q3SYG4 887 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ZNF324BQ6AW86 544 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ZNF549Q6P9A3 640 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 LINC00696Q6ZRV3 163 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 LAPTM4BQ86VI4 370 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 CPNE9Q8IYJ1 553 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 SMPDL3AQ92484 453 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 CABS1Q96KC9 395 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 LMF1Q96S06 567 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 YIPF2Q9BWQ6 316 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ZNF160Q9HCG1 818 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PPANQ9NQ55 473 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 FBXO5Q9UKT4 447 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 NCOA6Q14686 2063 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ENO4A6NNW6 628 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 VPS26AO75436 327 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PSIP1O75475 530 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 HAUS5O94927 633 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PGAM1P18669 254 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 SOX11P35716 441 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 DHX9Q08211 1270 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 CRYMQ14894 314 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ZRSR2Q15696 482 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 VWA2Q5GFL6 755 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 RNASEH2BQ5TBB1 312 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 IRAK1BP1Q5VVH5 260 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ARMC3Q5W041 872 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 RPUSD3Q6P087 351 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PRMT9Q6P2P2 845 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 FBXO42Q6P3S6 717 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 PIWIL4Q7Z3Z4 852 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 CFAP36Q96G28 342 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 SIGLEC10Q96LC7 697 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 ZNF282Q9UDV7 671 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 TRMT6Q9UJA5 497 aaKnown RBP18.23■□□□□ 0.51
CBWD3-204ENST00000377349 C3orf18Q9UK00 162 aa18.23■□□□□ 0.51
CBWD3-204ENST00000377349 TACC2O95359 2948 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 A0A1W2PQ72 361 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 MYO1CO00159 1063 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 SMAPO00193 183 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 DNALI1O14645 258 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-204ENST00000377349 ZG16O60844 167 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 SLC16A8O95907 504 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 STSP08842 583 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 ERGP11308 486 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 COX6A1P12074 109 aa18.22■□□□□ 0.51
CBWD3-204ENST00000377349 ACPPP15309 386 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms