RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TSPAN6O43657 245 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-203ENST00000375851 HMGCLP35914 325 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 OMPP47874 163 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 MTTPP55157 894 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CDKN2DP55273 166 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
C9orf47-203ENST00000375851 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ERMP1Q7Z2K6 904 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ATP6V1C2Q8NEY4 427 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 FAR1Q8WVX9 515 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 PKP4Q99569 1192 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 OR51V1Q9H2C8 321 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ABCB9Q9NP78 766 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ZCWPW2A0A1B0GU75 182 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-203ENST00000375851 RAB30Q15771 203 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ITPRIPL2Q3MIP1 535 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
C9orf47-203ENST00000375851 KRT74Q7RTS7 529 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 KRT77Q7Z794 578 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF433Q8N7K0 673 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CAMKVQ8NCB2 501 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 TP53INP1Q96A56 240 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 GORASP1Q9BQQ3 440 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 CCDC106Q9BWC9 280 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 DLGAP4Q9Y2H0 992 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 TRBC2A0A5B9 178 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 RFPL2O75678 378 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ALOX5P09917 674 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 FMO3P31513 532 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ATP4BP51164 291 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 PTGR1Q14914 329 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 AMZ1Q400G9 498 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 COQ7Q99807 217 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 UTS2RQ9UKP6 389 aa13.24□□□□□ -0.29
C9orf47-203ENST00000375851 B4DGG1 531 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 TMEM150CB9EJG8 249 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 FAM189A1O60320 539 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 UBXN7O94888 489 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SEPHS1P49903 392 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 RAB33AQ14088 237 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 UBAP2Q5T6F2 1119 aaKnown RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 ERN2Q76MJ5 926 aaKnown RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 GEMIN6Q8WXD5 167 aaKnown RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 MAP10Q9P2G4 905 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PLAGL1Q9UM63 463 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 BCHEP06276 602 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 MASP1P48740 699 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 BTN3A2P78410 334 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 GRB7Q14451 532 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 EIPR1Q53HC9 387 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 OGFOD2Q6N063 350 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 DIRAS2Q96HU8 199 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 AXIN1O15169 862 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 DIRAS1O95057 198 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 NPPAP01160 153 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PRKAR1AP10644 381 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 IQCCQ4KMZ1 466 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 NRSN1Q8IZ57 195 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 APCDD1Q8J025 514 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 COPS7AQ9UBW8 275 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 MKL2Q9ULH7 1088 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 MYO18AQ92614 2054 aaKnown RBP13.23□□□□□ -0.29
C9orf47-203ENST00000375851 TIAM2Q8IVF5 1701 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 ZBTB42B2RXF5 422 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PLOD3O60568 738 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 LATS1O95835 1130 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 GSRP00390 522 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 KCNC3Q14003 757 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 GPR68Q15743 365 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 NANOGP8Q6NSW7 305 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 PDPRQ8NCN5 879 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 NANOGQ9H9S0 305 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 TMEM138Q9NPI0 162 aa13.23□□□□□ -0.29
C9orf47-203ENST00000375851 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-203ENST00000375851 C9P02748 559 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms