RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MKLN1Q9UL63 735 aa19.08■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF451Q9Y4E5 1061 aa19.08■□□□□ 0.64
TRIM58-201ENST00000366481 EFCAB10A6NFE3 127 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 ANKRD66B4E2M5 251 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 ACSL4O60488 711 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 CSF2P04141 144 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 YBEYP58557 167 aaPredicted RBP19.07■□□□□ 0.64
TRIM58-201ENST00000366481 GALK2Q01415 458 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 ELP6Q0PNE2 266 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 XKR7Q5GH72 579 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF438Q7Z4V0 828 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 CDC26Q8NHZ8 85 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 GPR63Q9BZJ6 419 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 CIPCQ9C0C6 399 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 IPPKQ9H8X2 491 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 LYVE1Q9Y5Y7 322 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 WDR47O94967 919 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 PGRP06401 933 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 PRKACBP22694 351 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 ARMC12Q5T9G4 340 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 KIAA1614Q5VZ46 1190 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 UBQLNLQ8IYU4 475 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 LIX1Q8N485 282 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 CARNMT1Q8N4J0 409 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 GRPEL2Q8TAA5 225 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 SOCS4Q8WXH5 440 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 PSKH2Q96QS6 385 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 MGME1Q9BQP7 344 aa19.07■□□□□ 0.64
TRIM58-201ENST00000366481 MANSC4A6NHS7 340 aaPredicted RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 OR6C70A6NIJ9 312 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 DSCR3O14972 297 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 PCDHGA12O60330 932 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ABCB1P08183 1280 aaPredicted RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 PRR35P0CG20 571 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 CORO1AP31146 461 aaKnown RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 HTRA3P83110 453 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 CACHD1Q5VU97 1274 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SYCE2Q6PIF2 218 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 GTF2H4Q92759 462 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF566Q969W8 418 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 FUBP3Q96I24 572 aaKnown RBP eCLIP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SLC30A2Q9BRI3 323 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 REEP1Q9H902 201 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 C1orf109Q9NX04 203 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SCN10AQ9Y5Y9 1956 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 GREB1Q4ZG55 1949 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 C12orf71A8MTZ7 269 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 LRATO95237 230 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 C1QCP02747 245 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ITGAMP11215 1152 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 IL12RB1P42701 662 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 P2RX3P56373 397 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 CHRNEQ04844 493 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 GOLGA7Q7Z5G4 137 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 VTCN1Q7Z7D3 282 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 MED30Q96HR3 178 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SEPT4O43236 478 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 YES1P07947 543 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 STSP08842 583 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 JUNDP17535 347 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SLAMF1Q13291 335 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF177Q13360 481 aaPredicted RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 TAF1AQ15573 450 aaPredicted RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 PTRHD1Q6GMV3 140 aaKnown RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SHQ1Q6PI26 577 aaKnown RBP19.06■□□□□ 0.64
TRIM58-201ENST00000366481 GALNT7Q86SF2 657 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 SLC38A6Q8IZM9 456 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 ZNF675Q8TD23 568 aa19.06■□□□□ 0.64
TRIM58-201ENST00000366481 NLRC5Q86WI3 1866 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 ATP5C1P36542 298 aaKnown RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 FADDQ13158 208 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 NKAPQ8N5F7 415 aaKnown RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 IPCEF1Q8WWN9 437 aaPredicted RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 RASSF5Q8WWW0 418 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 MYDGFQ969H8 173 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 ULK4Q96C45 1275 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 GPR83Q9NYM4 423 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 PRSS21Q9Y6M0 314 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 C2orf78A6NCI8 922 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 GRK5P34947 590 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 HNF4AP41235 474 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 SLC11A1P49279 550 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 ATN1P54259 1190 aaPredicted RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 SNRPD2P62316 118 aaKnown RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 PRKCDQ05655 676 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 LRRC73Q5JTD7 316 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 SDE2Q6IQ49 451 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 REM2Q8IYK8 340 aaPredicted RBP19.05■□□□□ 0.64
TRIM58-201ENST00000366481 PIK3R3Q92569 461 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 TTPALQ9BTX7 342 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 SLC25A37Q9NYZ2 338 aa19.05■□□□□ 0.64
TRIM58-201ENST00000366481 MEIOCA2RUB1 952 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 ARNTLO00327 626 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 KIAA0513O60268 411 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 SH3BGRLO75368 114 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 EPOP01588 193 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 COL6A1P12109 1028 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 MAPKAPK2P49137 400 aa19.04■□□□□ 0.64
TRIM58-201ENST00000366481 GPLD1P80108 840 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms