RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SCGB3A2Q96PL1 93 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 DPYSL5Q9BPU6 564 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 POFUT2Q9Y2G5 429 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ZNF705EA8MWA4 302 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-203ENST00000359759 MTX2O75431 263 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ANXA8P13928 327 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 CYP3A5P20815 502 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ERVK-8P63133 956 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 CAP1Q01518 475 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ARSJQ5FYB0 599 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-203ENST00000359759 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 SLC30A8Q8IWU4 369 aa15.64■□□□□ 0.09
COL18A1-203ENST00000359759 ZNF641Q96N77 438 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-203ENST00000359759 NUSAP1Q9BXS6 441 aaKnown RBP15.64■□□□□ 0.09
COL18A1-203ENST00000359759 A0A1B0GVC2 190 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TRIM64BA6NI03 449 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NPIPA5E9PKD4 350 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TREHO43280 583 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 JUNP05412 331 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 MRPL3P09001 348 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ALPIP09923 528 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 RPL17P18621 184 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 MAGEA8P43361 318 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NDST2P52849 883 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 LRP8Q14114 963 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 RPS27LQ71UM5 84 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 DNAJB7Q7Z6W7 309 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 PIM3Q86V86 326 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 GLB1L3Q8NCI6 653 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 HCAR2Q8TDS4 363 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 OR52B2Q96RD2 323 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NDC1Q9BTX1 674 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TIGARQ9NQ88 270 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ZCCHC3Q9NUD5 404 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 DNAJC27Q9NZQ0 273 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ZDHHC2Q9UIJ5 367 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NPIPA1Q9UND3 350 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 SLC15A5A6NIM6 579 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CDC7O00311 574 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 SP2Q02086 613 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 PLGLB1Q02325 96 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 PAMR1Q6UXH9 720 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NKD2Q969F2 451 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ABI3Q9P2A4 366 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TBC1D14Q9P2M4 693 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 KCNIP3Q9Y2W7 256 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 FAM170BA6NMN3 283 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TLX2O43763 284 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NFATC1O95644 943 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 GBAP04062 536 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 C8orf89P0DMQ9 161 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ZNF14P17017 642 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 BDKRB1P46663 353 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CCR8P51685 355 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 OR52E4Q8NGH9 312 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 HERVK_113Q902F9 699 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 DNAJA3Q96EY1 480 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 FLRT1Q9NZU1 646 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TRBC2A0A5B9 178 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 H1F0P07305 194 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 GNAZP19086 355 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CSKP41240 450 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 SMSP52788 366 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 PNLIPRP1P54315 467 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CREB5Q02930 508 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NFATC2Q13469 925 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TMEM44Q2T9K0 475 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 CCDC58Q4VC31 144 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 UBE2Q1Q7Z7E8 422 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TFAP2BQ92481 460 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 FBXW11Q9UKB1 542 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TVP23AA6NH52 213 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 BLOC1S5-TXNDC5H3BN57 136 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ECI2O75521 394 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 MLLT3P42568 568 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 NSG1P42857 185 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 E2F1Q01094 437 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TUBB3Q13509 450 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 RIC1Q4ADV7 1423 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ABHD13Q7L211 337 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TMEM209Q96SK2 561 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 WDR77Q9BQA1 342 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 SSU72Q9NP77 194 aaKnown RBP15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ENAMQ9NRM1 1142 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 ERVK-18Q9QC07 812 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 SLC7A8Q9UHI5 535 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 PLAGL1Q9UM63 463 aa15.63■□□□□ 0.09
COL18A1-203ENST00000359759 TBX10O75333 385 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 ADH7P40394 386 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 ZNF81P51508 661 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 UFM1P61960 85 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 HNRNPA0Q13151 305 aaKnown RBP15.62■□□□□ 0.09
COL18A1-203ENST00000359759 PAQR3Q6TCH7 311 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 LRRN1Q6UXK5 716 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 PCBD2Q9H0N5 130 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 CPQQ9Y646 472 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 CLCA3PQ9Y6N3 262 aa15.62■□□□□ 0.09
COL18A1-203ENST00000359759 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms