RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 PIM1P11309 404 aaPredicted RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 PTNP21246 168 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 ZNF385BQ569K4 471 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 TMEM214Q6NUQ4 689 aaKnown RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 NOXRED1Q6NXP6 359 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 DLEU7Q6UYE1 221 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 WDR53Q7Z5U6 358 aaPredicted RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 DHFR2Q86XF0 187 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 OR1E3Q8WZA6 343 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 KCTD14Q9BQ13 255 aaPredicted RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 MMADHCQ9H3L0 296 aaPredicted RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
LSS-201ENST00000356396 GEMIN8Q9NWZ8 242 aaKnown RBP13.39□□□□□ -0.27
LSS-201ENST00000356396 TSPAN11A1L157 253 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 OR2W5A6NFC9 320 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 KRT6AP02538 564 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 KRT6BP04259 564 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 CEACAM5P06731 702 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 C8GP07360 202 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 C8orf89P0DMQ9 161 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 GSSP48637 474 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 KRT6CP48668 564 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 USP39Q53GS9 565 aaKnown RBP13.38□□□□□ -0.27
LSS-201ENST00000356396 DSG4Q86SJ6 1040 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■■■ 53
LSS-201ENST00000356396 ECSITQ9BQ95 431 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 C1QTNF3Q9BXJ4 246 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 EXD2Q9NVH0 621 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 RAPGEFL1Q9UHV5 662 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 NEUROG3Q9Y4Z2 214 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 KCNE1BA0A087WTH5 132 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 SH3BP5O60239 455 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 DNAJB6O75190 326 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 CTSBP07858 339 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ANXA4P09525 319 aaPredicted RBP13.38□□□□□ -0.27
LSS-201ENST00000356396 ACTR1BP42025 376 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 RAB8AP61006 207 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ACTR1AP61163 376 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 LRRC23Q53EV4 343 aaPredicted RBP13.38□□□□□ -0.27
LSS-201ENST00000356396 LRRTM4Q86VH4 590 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 SLC13A3Q8WWT9 602 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 LRGUKQ96M69 825 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 COQ10BQ9H8M1 238 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 IL1RL1Q01638 556 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ACSM2AQ08AH3 577 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 CAMK2GQ13555 558 aaPredicted RBP13.38□□□□□ -0.27
LSS-201ENST00000356396 GBX1Q14549 363 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 NKG7Q16617 165 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ACSM2BQ68CK6 577 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ZNF776Q68DI1 518 aaPredicted RBP13.38□□□□□ -0.27
LSS-201ENST00000356396 ZFAND4Q86XD8 727 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 PQLC1Q8N2U9 271 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 ANKRD53Q8N9V6 530 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 PCYOX1LQ8NBM8 494 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 GTF2H4Q92759 462 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 SERPINI1Q99574 410 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 NTMT1Q9BV86 223 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 KLHL31Q9H511 634 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 SPASTQ9UBP0 616 aa13.38□□□□□ -0.27
LSS-201ENST00000356396 RP1P56715 2156 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 MDC1Q14676 2089 aaKnown RBP13.37□□□□□ -0.27
LSS-201ENST00000356396 MGAT4DA6NG13 374 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 ZNF860A6NHJ4 632 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 EEDO75530 441 aaKnown RBP13.37□□□□□ -0.27
LSS-201ENST00000356396 GNAO1P09471 354 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 COX7A2P14406 83 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 TYRP1P17643 537 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 GABRG2P18507 467 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 HRH2P25021 359 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 TBCELQ5QJ74 424 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 SDE2Q6IQ49 451 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
LSS-201ENST00000356396 EME1Q96AY2 570 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 FSCN3Q9NQT6 498 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 SMOXQ9NWM0 555 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 EIF3LQ9Y262 564 aaKnown RBP13.37□□□□□ -0.27
LSS-201ENST00000356396 SNX8Q9Y5X2 465 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
LSS-201ENST00000356396 SLC35G4P0C7Q5 338 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 JAK1P23458 1154 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 DCDC1P59894 354 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 EMX2Q04743 252 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 UGT8Q16880 541 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 NLRP8Q86W28 1048 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 OFCC1Q8IZS5 231 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 CGREF1Q99674 301 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 AP4S1Q9Y587 144 aa13.37□□□□□ -0.27
LSS-201ENST00000356396 KCNE2Q9Y6J6 123 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms