RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 AIPL1Q9NZN9 384 aa10.7□□□□□ -0.7
RTN3-204ENST00000354497 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
RTN3-204ENST00000354497 SVILO95425 2214 aa10.7□□□□□ -0.7
RTN3-204ENST00000354497 MTORP42345 2549 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 KDM1AO60341 852 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 PROSCO94903 275 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 RHOXF2BP0C7M4 288 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 ATP1B2P14415 290 aaPredicted RBP10.69□□□□□ -0.7
RTN3-204ENST00000354497 CARSP49589 748 aaKnown RBP10.69□□□□□ -0.7
RTN3-204ENST00000354497 UBASH3AP57075 661 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 KLC1Q07866 573 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 HIBCHQ6NVY1 386 aaPredicted RBP10.69□□□□□ -0.7
RTN3-204ENST00000354497 CNSTQ6PJW8 725 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 LRIG3Q6UXM1 1119 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 TMEM200AQ86VY9 491 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 MCATQ8IVS2 390 aaKnown RBP10.69□□□□□ -0.7
RTN3-204ENST00000354497 ULK4Q96C45 1275 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 MRGPRX2Q96LB1 330 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 TEKT5Q96M29 485 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 COPS8Q99627 209 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 RHOXF2Q9BQY4 288 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 VPS37BQ9H9H4 285 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 CTTNBP2NLQ9P2B4 639 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 ASF1AQ9Y294 204 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 MYO7BQ6PIF6 2116 aa10.69□□□□□ -0.7
RTN3-204ENST00000354497 CCT8L1PA6NM43 557 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 C2orf81A6NN90 581 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 PRAMEF2O60811 474 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 WDPCPO95876 746 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 CELA2AP08217 269 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 PRR35P0CG20 571 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 MAGP20916 626 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 CALB2P22676 271 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 CD68P34810 354 aaPredicted RBP10.68□□□□□ -0.7
RTN3-204ENST00000354497 SOX11P35716 441 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 RAB28P51157 221 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 SLC7A5Q01650 507 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 OCA2Q04671 838 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 LSAMPQ13449 338 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 CCDC153Q494R4 210 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 ODF2Q5BJF6 829 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 OR52E8Q6IFG1 317 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 NLRP9Q7RTR0 991 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 APTXQ7Z2E3 356 aaKnown RBP10.68□□□□□ -0.7
RTN3-204ENST00000354497 ZNF554Q86TJ5 538 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 SLC15A3Q8IY34 581 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 DTWD1Q8N5C7 304 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 AGAP11Q8TF27 550 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 DYDC1Q8WWB3 177 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 HAS2Q92819 552 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 SH3GL1Q99961 368 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 TSPAN10Q9H1Z9 355 aaPredicted RBP10.68□□□□□ -0.7
RTN3-204ENST00000354497 SLC26A1Q9H2B4 701 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.68□□□□□ -0.7
RTN3-204ENST00000354497 C3orf18Q9UK00 162 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
RTN3-204ENST00000354497 TMEM247A6NEH6 219 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 WISP2O76076 250 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 KRT1P04264 644 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 EIF2S1P05198 315 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 ITGALP20701 1170 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CXCR2P25025 360 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 PEBP1P30086 187 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 GRIA3P42263 894 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 SKIV2L2P42285 1042 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 PPP2R2AP63151 447 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ZNF33BQ06732 778 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 GRM7Q14831 915 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TTMPQ5BVD1 217 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 GKAP1Q5VSY0 366 aaPredicted RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 SLC9A4Q6AI14 798 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 THOC7Q6I9Y2 204 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 KLC3Q6P597 504 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 NDUFAF7Q7L592 441 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 C2orf73Q8N5S3 287 aaPredicted RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 FLVCR1-AS1Q8TAF5 88 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ADAMTS18Q8TE60 1221 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CA5BP1Q8WTZ4 195 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 PSMF1Q92530 271 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 OXNAD1Q96HP4 312 aaPredicted RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 OLFM3Q96PB7 478 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 FICDQ9BVA6 458 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CHRNA10Q9GZZ6 450 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 IL1RAPL1Q9NZN1 696 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 NDUFA13Q9P0J0 144 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 MEMO1Q9Y316 297 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 L3MBTL1Q9Y468 752 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 OR5H15A6NDH6 313 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CCL22O00626 93 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ZNHIT1O43257 154 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 BMP10O95393 424 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 AGTP01019 485 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 EPOP01588 193 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 SERPINA7P05543 415 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CCDC159P0C7I6 412 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms