RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 BRAT1Q6PJG6 821 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 CMTM8Q8IZV2 173 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 PIGKQ92643 395 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 MRGPRX2Q96LB1 330 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 Q9Y3F1 56 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 XPNPEP2O43895 674 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 CEACAM20Q6UY09 585 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 RASSF6Q6ZTQ3 369 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 RDH12Q96NR8 316 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 SLC2A13Q96QE2 648 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 TBX5Q99593 518 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 PFDN2Q9UHV9 154 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 BCHEP06276 602 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 CCR8P51685 355 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 SNAP47Q5SQN1 464 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 NATD1Q8N6N6 113 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 RNF31Q96EP0 1072 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 TM9SF3Q9HD45 589 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 GJA1P17302 382 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 TUBA3EQ6PEY2 450 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 VITQ6UXI7 678 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 NPAS3Q8IXF0 933 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
RTN4-202ENST00000337526 MAPKAP1Q9BPZ7 522 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 SEMA3DO95025 777 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 SLC2A2P11168 524 aaPredicted RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 CD1DP15813 335 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 DCDC1P59894 354 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 ZNF792Q3KQV3 632 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 UNC50Q53HI1 259 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 LRRC66Q68CR7 880 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 UMODL1-AS1Q8N2C9 162 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 GPER1Q99527 375 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 MRPS30Q9NP92 439 aaKnown RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 GBAP04062 536 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 ALAS2P22557 587 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 ELK4P28324 431 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 IGFALSP35858 605 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 ARF5P84085 180 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 MYLK3Q32MK0 819 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 BTN2A1Q7KYR7 527 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 HDAC2Q92769 488 aaKnown RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 KLK6Q92876 244 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 PEX13Q92968 403 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 CMTM7Q96FZ5 175 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 OR51B5Q9H339 312 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
RTN4-202ENST00000337526 PARP4Q9UKK3 1724 aaKnown RBP13.37□□□□□ -0.27
RTN4-202ENST00000337526 H0YAE9 185 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 S1PR4O95977 384 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 GIMD1P0DJR0 217 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 VBP1P61758 197 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CLDN10P78369 228 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CSTF1Q05048 431 aaKnown RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 SOX4Q06945 474 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 NIPAL4Q0D2K0 466 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 SMYD5Q6GMV2 418 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 AQP11Q8NBQ7 271 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 OR6K6Q8NGW6 343 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 NFKBIDQ8NI38 313 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 RGMAQ96B86 450 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CCM2Q9BSQ5 444 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 RNF6Q9Y252 685 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 SOCS7O14512 581 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 AKAP8O43823 692 aaKnown RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 OR1I1O60431 355 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 DFNA5O60443 496 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 HAPLN1P10915 354 aaPredicted RBP13.36□□□□□ -0.27
RTN4-202ENST00000337526 GSTM3P21266 225 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 HSD17B2P37059 387 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 GRK6P43250 576 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 DCAF4L2Q8NA75 395 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 CHST4Q8NCG5 386 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 TTLQ8NG68 377 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 ALPK1Q96QP1 1244 aa13.36□□□□□ -0.27
RTN4-202ENST00000337526 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms