RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF696Q9H7X3 374 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 AGPAT4Q9NRZ5 378 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ELOVL2Q9NXB9 296 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 EHD3Q9NZN3 535 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 DNAJB9Q9UBS3 223 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TMCC3Q9ULS5 477 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 KLHL20Q9Y2M5 609 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TSC22D2O75157 780 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CKMT1AP12532 417 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ACPPP15309 386 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RPS7P62081 194 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 TEAD2Q15562 447 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 SOWAHCQ53LP3 525 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 CATSPEREQ5SY80 951 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 GRASPQ7Z6J2 395 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 P2RY8Q86VZ1 359 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 SLAIN1Q8ND83 568 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 FAR1Q8WVX9 515 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 GAB3Q8WWW8 586 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 CLIP3Q96DZ5 547 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 BARD1Q99728 777 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 NRTNQ99748 197 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 COPS4Q9BT78 406 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 EMILIN2Q9BXX0 1053 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 XKR8Q9H6D3 395 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ZNF334Q9HCZ1 680 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 VPS29Q9UBQ0 182 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ABCG2Q9UNQ0 655 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 INSL5Q9Y5Q6 135 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 E7EQ34 232 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 FAM227AF5H4B4 570 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 SLC22A2O15244 555 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 SLC31A1O15431 190 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 JAK1P23458 1154 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 TPTEP56180 551 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 EEFSECP57772 596 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
HPS4-201ENST00000336873 DSC3Q14574 896 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 INO80DQ53TQ3 878 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 ZC3H12BQ5HYM0 836 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 C6orf141Q5SZD1 244 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MANEALQ5VSG8 457 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 NOXRED1Q6NXP6 359 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CRTC1Q6UUV9 634 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CYP4Z1Q86W10 505 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 REM2Q8IYK8 340 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 ZNF740Q8NDX6 193 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 TAMM41Q96BW9 452 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 PPCDCQ96CD2 204 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MAELQ96JY0 434 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 DHRS1Q96LJ7 313 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 DMRTB1Q96MA1 342 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ZNF382Q96SR6 550 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ACPTQ9BZG2 426 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MRM3Q9HC36 420 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 CREBZFQ9NS37 354 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 FAM118AQ9NWS6 357 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MARCH5Q9NX47 278 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 DKK3Q9UBP4 350 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MBD1Q9UIS9 605 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 GSAPA4D1B5 854 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 H3BSH0 61 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 OR7A17O14581 309 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RGS10O43665 173 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CLPXO76031 633 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 C6orf47O95873 294 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 PCCBP05166 539 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 EPHX1P07099 455 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RPS17P08708 135 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 VIPR2P41587 438 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RPL34P49207 117 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 PTPN5P54829 565 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RAB25P57735 213 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 TAS2R50P59544 299 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 CYBRD1Q53TN4 286 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 FAAH2Q6GMR7 532 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 AGTRAPQ6RW13 159 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 PTCHD4Q6ZW05 846 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 LIMS2Q7Z4I7 341 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 EID2BQ96D98 161 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 OSBPL10Q9BXB5 764 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 SEZ6LQ9BYH1 1024 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 HMG20AQ9NP66 347 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 THUMPD1Q9NXG2 353 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 TAS2R16Q9NYV7 291 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 ZIM2Q9NZV7 527 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 CD300AQ9UGN4 299 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 MRPS7Q9Y2R9 242 aaKnown RBP7.98□□□□□ -1.13
HPS4-201ENST00000336873 PIKFYVEQ9Y2I7 2098 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 RLFQ13129 1914 aa7.98□□□□□ -1.13
HPS4-201ENST00000336873 FEZF1A0PJY2 475 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 RASAL1O95294 804 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 C8BP07358 591 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms