RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HOPXQ9BPY8 73 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SGK2Q9HBY8 427 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 CCDC177Q9NQR7 707 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 DLGAP4Q9Y2H0 992 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 LRRC72A6NJI9 287 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 NPIPB8E9PQR5 432 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 MAN2B1O00754 1011 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 FAM58BPP0C7Q3 252 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC7A1P30825 629 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SH3BGRP55822 239 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 DDX39BQ13838 428 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 CAPRIN1Q14444 709 aaKnown RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 AP1ARQ63HQ0 302 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 ADNP2Q6IQ32 1131 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 PGBD3Q8N328 593 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 MINDY1Q8N5J2 469 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 METTL25Q8N6Q8 603 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 EME1Q96AY2 570 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 SCARF2Q96GP6 870 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 ZNF597Q96LX8 424 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 GID8Q9NWU2 228 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 LEF1Q9UJU2 399 aaPredicted RBP19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 DYRK1BQ9Y463 629 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 PCDHGA11Q9Y5H2 935 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 PCM1Q15154 2024 aa19.57■□□□□ 0.72
RIPPLY3-201ENST00000329553 PRR19A6NJB7 356 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 PI15O43692 258 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 RPN2P04844 631 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC7A2P52569 658 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 DGKQP52824 942 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 ZNF33BQ06732 778 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 APOFQ13790 326 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 IRAK1BP1Q5VVH5 260 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 PTCRAQ6ISU1 281 aaPredicted RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 ZNF852Q6ZMS4 543 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 Q7L0L9 218 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 OR7G3Q8NG95 312 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 TRIT1Q9H3H1 467 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLAMF8Q9P0V8 285 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 CA14Q9ULX7 337 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 FPGTO14772 594 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 VILLO15195 856 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 HOXC4P09017 264 aaPredicted RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 AMD1P17707 334 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 HNRNPA2B1P22626 353 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 CSTF3Q12996 717 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 NFYCQ13952 458 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 CHERPQ8IWX8 916 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 DENND6BQ8NEG7 585 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 CLHC1Q8NHS4 586 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 SETD7Q8WTS6 366 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 LRTOMTQ8WZ04 291 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 WDR34Q96EX3 536 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 C12orf66Q96MD2 445 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 MENTQ9BUN1 341 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 DPY30Q9C005 99 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 SPATA6Q9NWH7 488 aaPredicted RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 C2orf42Q9NWW7 574 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 USP36Q9P275 1121 aaKnown RBP19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 PADI4Q9UM07 663 aa19.56■□□□□ 0.72
RIPPLY3-201ENST00000329553 C7orf72A4D263 438 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 C1GALT1C1LP0DN25 315 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 ERGP11308 486 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 KIAA1024LP59773 190 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 CLCA4Q14CN2 919 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 TPRG1LQ5T0D9 272 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC2A7Q6PXP3 512 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 ENPP7Q6UWV6 458 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 TBC1D21Q8IYX1 336 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 ZNF687Q8N1G0 1237 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 KRTCAP2Q8N6L1 136 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 APOLD1Q96LR9 279 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 FERD3LQ96RJ6 166 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 COQ10BQ9H8M1 238 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 POLMQ9NP87 494 aaPredicted RBP19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 PRSS38A1L453 326 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 DYTNA2CJ06 578 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 KCNJ13O60928 360 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 IL9P15248 144 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC6A2P23975 617 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 LEXMQ3ZCV2 418 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 NADK2Q4G0N4 442 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 ATG9BQ674R7 924 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 MED27Q6P2C8 311 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 IYDQ6PHW0 289 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 ISLR2Q6UXK2 745 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC15A3Q8IY34 581 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 SLC5A11Q8WWX8 675 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 RBM38Q9H0Z9 239 aaKnown RBP19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 SEMA6AQ9H2E6 1030 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 CARS2Q9HA77 564 aaKnown RBP19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 LMAN1LQ9HAT1 526 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 GMPR2Q9P2T1 348 aaKnown RBP19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 VPS29Q9UBQ0 182 aa19.55■□□□□ 0.72
RIPPLY3-201ENST00000329553 MAGEB17A8MXT2 336 aa19.54■□□□□ 0.72
RIPPLY3-201ENST00000329553 SEMA4FO95754 770 aa19.54■□□□□ 0.72
RIPPLY3-201ENST00000329553 PCNAP12004 261 aa19.54■□□□□ 0.72
RIPPLY3-201ENST00000329553 TACR1P25103 407 aa19.54■□□□□ 0.72
RIPPLY3-201ENST00000329553 TXNL4AP83876 142 aaKnown RBP19.54■□□□□ 0.72
RIPPLY3-201ENST00000329553 NFATC4Q14934 902 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms