RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ZNF354AO60765 605 aaPredicted RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 TOMM70O94826 608 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 TRIM21P19474 475 aaKnown RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 DNA2P51530 1060 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 DCAF7P61962 342 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 TMEM132DQ14C87 1099 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 PHKG1Q16816 387 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 GARNL3Q5VVW2 1013 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 RSBN1Q5VWQ0 802 aaPredicted RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 RNLSQ5VYX0 342 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 ARMC3Q5W041 872 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 OLFML2AQ68BL7 652 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 OR8H2Q8N162 312 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 FAM89BQ8N5H3 189 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 GPATCH11Q8N954 259 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 OR7A2PQ8NGA2 310 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 HDAC2Q92769 488 aaKnown RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 SLAMF9Q96A28 289 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 ADNPQ9H2P0 1102 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 EQTNQ9NQ60 294 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 EIF2B3Q9NR50 452 aaKnown RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 TBC1D22BQ9NU19 505 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 SELENOKQ9Y6D0 94 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 R4GN57 208 aa2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 TDRD6O60522 2096 aaKnown RBP2.21□□□□□ -2.06
CBX3P1-201ENST00000325243 ITIH6Q6UXX5 1313 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TRIM49BA6NDI0 452 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 NEMP2A6NFY4 417 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 B4DLN1 442 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 PTGES3LE9PB15 166 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TRAFD1O14545 582 aaPredicted RBP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 AHCYL1O43865 530 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 ELAVL4P26378 380 aaKnown RBP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 RAD52P43351 418 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 MRPL12P52815 198 aaKnown RBP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 DHODHQ02127 395 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 NUCB1Q02818 461 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 SRSF9Q13242 221 aaKnown RBP eCLIP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 SGCGQ13326 291 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TRA2AQ13595 282 aaKnown RBP eCLIP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TRIM29Q14134 588 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 PLEKHS1Q5SXH7 462 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 C1QTNF12Q5T7M4 302 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 CCBE1Q6UXH8 406 aaPredicted RBP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TMEM64Q6YI46 380 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 ARHGAP22Q7Z5H3 698 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 RNF130Q86XS8 419 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 LGI2Q8N0V4 545 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 C11orf42Q8N5U0 333 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 CSNK1G2-AS1Q8NCQ2 148 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 SFXN2Q96NB2 322 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 PAFAH2Q99487 392 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 ABT1Q9ULW3 272 aaKnown RBP2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 NTNG1Q9Y2I2 539 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 TMED3Q9Y3Q3 217 aa2.2□□□□□ -2.06
CBX3P1-201ENST00000325243 KAT6BQ8WYB5 2073 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 RALGAPA1Q6GYQ0 2036 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 LOC102723996A0A087X1L8 192 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 GPR75-ASB3A0A0A6YYF3 556 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 IGHV3-38A0A0C4DH36 116 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 FSD2A1L4K1 749 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 C2CD4DB7Z1M9 353 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 K7ENM7 598 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 MEIS2O14770 477 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 VILLO15195 856 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 TLX2O43763 284 aaPredicted RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 PTP4A3O75365 173 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 PRKG2Q13237 762 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ITGA7Q13683 1181 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ZNF146Q15072 292 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 GPR33Q49SQ1 333 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 FAM205BPQ63HN1 556 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ITPRIPL1Q6GPH6 555 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 C4orf50Q6ZRC1 276 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 FCRLAQ7L513 359 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 NDUFAF2Q8N183 169 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 GUF1Q8N442 669 aaKnown RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 CD177Q8N6Q3 437 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 SNRNP27Q8WVK2 155 aaKnown RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 SYN2Q92777 582 aaPredicted RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 SPDL1Q96EA4 605 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 RSRC1Q96IZ7 334 aaKnown RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 CCDC3Q9BQI4 270 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ZMYND12Q9H0C1 365 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 JPT2Q9H910 190 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ANKEF1Q9NU02 776 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ZNF581Q9P0T4 197 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 STK26Q9P289 416 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 PRDM4Q9UKN5 801 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 ELF5Q9UKW6 265 aaPredicted RBP2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 PADI2Q9Y2J8 665 aa2.19□□□□□ -2.06
CBX3P1-201ENST00000325243 LOC100509620A0A075B734 347 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 TMEM129A0AVI4 362 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 CTDSP2O14595 271 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 ADAMDEC1O15204 470 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 SURF4O15260 269 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 DOK2O60496 412 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 ATP1B1P05026 303 aa2.18□□□□□ -2.06
CBX3P1-201ENST00000325243 PCP11498 1178 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms