RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
RAB39A-201ENST00000320578 SH2B3Q9UQQ2 575 aa17.2■□□□□ 0.34
RAB39A-201ENST00000320578 TRIOBPQ9H2D6 2365 aa17.2■□□□□ 0.34
RAB39A-201ENST00000320578 A0A1W2PPV9 198 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 NME4O00746 187 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 FOSL2P15408 326 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 PKLRP30613 574 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 ASMTP46597 345 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 FZD5Q13467 585 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 RPE65Q16518 533 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 WLSQ5T9L3 541 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 IRAK1BP1Q5VVH5 260 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 PGBD3Q8N328 593 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 GOLM1Q8NBJ4 401 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 OR4K1Q8NGD4 311 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 OR8J3Q8NGG0 315 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 SLC45A3Q96JT2 553 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 MYOCQ99972 504 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 SLC39A3Q9BRY0 314 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 KIR3DX1Q9H7L2 352 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 PLAGL1Q9UM63 463 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 MAN2B2Q9Y2E5 1009 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 PLEKHM1Q9Y4G2 1056 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 CFAP20Q9Y6A4 193 aaKnown RBP17.19■□□□□ 0.34
RAB39A-201ENST00000320578 COLEC10Q9Y6Z7 277 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 KCNH1O95259 989 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 STAMBPO95630 424 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 MTHFD1P11586 935 aaKnown RBP17.19■□□□□ 0.34
RAB39A-201ENST00000320578 PCNAP12004 261 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 VHLP40337 213 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 MTAPQ13126 283 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 MAPKAPK3Q16644 382 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 FAM174BQ3ZCQ3 159 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 NANOGP8Q6NSW7 305 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 SLC2A7Q6PXP3 512 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 RNF148Q8N7C7 305 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 TSTD1Q8NFU3 115 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 GTF2H4Q92759 462 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 CGREF1Q99674 301 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 AIF1LQ9BQI0 150 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 NANOGQ9H9S0 305 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 IL1RL2Q9HB29 575 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 LTB4R2Q9NPC1 389 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 DMRT3Q9NQL9 472 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 DGKBQ9Y6T7 804 aa17.19■□□□□ 0.34
RAB39A-201ENST00000320578 DOCK9Q9BZ29 2069 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 PDZK1P1A8MUH7 402 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 C8BP07358 591 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 CDH1P12830 882 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 CD6P30203 668 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 CCR8P51685 355 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 DGKQP52824 942 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 RPS13P62277 151 aaKnown RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 SRSF11Q05519 484 aaKnown RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 TSTA3Q13630 321 aaPredicted RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 FXNQ16595 210 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 SPANXN4Q5MJ08 99 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 TMIGD1Q6UXZ0 262 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 PTRH1Q86Y79 214 aaKnown RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 KIAA2013Q8IYS2 634 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 BHLHE22Q8NFJ8 381 aaPredicted RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 SH3KBP1Q96B97 665 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 TOE1Q96GM8 510 aaKnown RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 RMND5AQ9H871 391 aa17.18■□□□□ 0.34
RAB39A-201ENST00000320578 IMP3Q9NV31 184 aaKnown RBP17.18■□□□□ 0.34
RAB39A-201ENST00000320578 H3BNX3 289 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 ERN1O75460 977 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TACR1P25103 407 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PTX3P26022 381 aaPredicted RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 S100A3P33764 101 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 SRP54P61011 504 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 ABATP80404 500 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 DDX39BQ13838 428 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 CAPRIN1Q14444 709 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 C6orf10Q5SRN2 563 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 LRRC74BQ6ZQY2 392 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TMEM126BQ8IUX1 230 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 KRTCAP2Q8N6L1 136 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 LINC01555Q8NAE3 123 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PYDC1Q8WXC3 89 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PDXPQ96GD0 296 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 SH3GL1Q99961 368 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TRIM15Q9C019 465 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 KCNH6Q9H252 994 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 C6orf106Q9H6K1 298 aaPredicted RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PRDM8Q9NQV8 689 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 GPR27Q9NS67 375 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TAC3Q9UHF0 121 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 CA14Q9ULX7 337 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PCDHB11Q9Y5F2 797 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 H0Y8X5 98 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 ETHE1O95571 254 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 IL9P15248 144 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 REEP5Q00765 189 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 RHDQ02161 417 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 PRDX1Q06830 199 aaKnown RBP17.17■□□□□ 0.34
RAB39A-201ENST00000320578 KRT33BQ14525 404 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 TPRG1LQ5T0D9 272 aa17.17■□□□□ 0.34
RAB39A-201ENST00000320578 LRIF1Q5T3J3 769 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms