RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CTSCP53634 463 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GSTM4Q03013 218 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 FOXM1Q08050 763 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GALNT1Q10472 559 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 NCF4Q15080 339 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 PDCD4Q53EL6 469 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 WDR45BQ5MNZ6 344 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 AQP12AQ8IXF9 295 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SVOPQ8N4V2 548 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 RPLP0P6Q8NHW5 317 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 CANT1Q8WVQ1 401 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 MEAF6Q9HAF1 191 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 NUMBLQ9Y6R0 609 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 PDYNP01213 254 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 LAMP2P13473 410 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 UGT2B15P54855 530 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 ERVPABLB-1P60509 514 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 BTN3A2P78410 334 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SLC9B2Q86UD5 537 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 FAM47BQ8NA70 645 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 CCDC106Q9BWC9 280 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 MVB12BQ9H7P6 319 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SERPINA1P01009 418 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 JUPP14923 745 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 HTR6P50406 440 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 ATP4BP51164 291 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 ZNF155Q12901 538 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 C10orf62Q5T681 223 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 TYW3Q6IPR3 259 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 RFLNAQ6ZTI6 216 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GKN2Q86XP6 184 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 EPS8L2Q9H6S3 715 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 LMAN1LQ9HAT1 526 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 IKZF3Q9UKT9 509 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 FABP3P05413 133 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GUCA1AP43080 201 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 YAP1P46937 504 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 RGS8P57771 180 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 TAS2R41P59536 307 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 DUSP6Q16828 381 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 TOR1AIP1Q5JTV8 583 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SFRP1Q8N474 314 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 OR5AK3PQ8NH89 298 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 MYEOVQ96EZ4 313 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 SLC35A5Q9BS91 424 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GSTO2Q9H4Y5 243 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 DKK3Q9UBP4 350 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 PRSS21Q9Y6M0 314 aa13.25□□□□□ -0.29
DDX54-202ENST00000314045 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
DDX54-202ENST00000314045 KRT87PA6NCN2 255 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 H3BNH8 94 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 hCG_2039718K7EN88 272 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 BCKDHAP12694 445 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 CYP4B1P13584 511 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 SLC7A1P30825 629 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 CCR7P32248 378 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 PBX2P40425 430 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 LARS2Q15031 903 aaKnown RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 TMEM214Q6NUQ4 689 aaKnown RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 ZDHHC21Q8IVQ6 265 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 TSPAN14Q8NG11 270 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 RHBDF1Q96CC6 855 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 COL11A1P12107 1806 aaPredicted RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 OR6A2O95222 327 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 PGM3O95394 542 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 BMP7P18075 431 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 SERPINB1P30740 379 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 ZNF763Q0D2J5 394 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 DUOXA1Q1HG43 343 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 AP1ARQ63HQ0 302 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 GALNT7Q86SF2 657 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 CLVS1Q8IUQ0 354 aaPredicted RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 ARMC8Q8IUR7 673 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 CHCHD4Q8N4Q1 142 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 NATD1Q8N6N6 113 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 OR52J3Q8NH60 311 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 NCSTNQ92542 709 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 DNASE1L2Q92874 299 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 WDR83Q9BRX9 315 aaKnown RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 MAT2BQ9NZL9 334 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 GMEB2Q9UKD1 530 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 ARPC2O15144 300 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 JUNP05412 331 aaKnown RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 HNRNPA2B1P22626 353 aaKnown RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 PCBP2Q15366 365 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms