RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CHAF1BQ13112 559 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 ZNF517Q6ZMY9 492 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-201ENST00000311943 RPS27LQ71UM5 84 aaKnown RBP11.52□□□□□ -0.57
SCFD1-201ENST00000311943 VN1R4Q7Z5H5 301 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 DSELQ8IZU8 1212 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 RHBDF1Q96CC6 855 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 C10orf90Q96M02 699 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 EGFL8Q99944 293 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 SELENOSQ9BQE4 189 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 RAB11FIP5Q9BXF6 653 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 FUT8Q9BYC5 575 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 VPS11Q9H270 941 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 ACTL8Q9H568 366 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 SYTL2Q9HCH5 934 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 NSMCE4AQ9NXX6 385 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 RUVBL1Q9Y265 456 aaKnown RBP11.52□□□□□ -0.57
SCFD1-201ENST00000311943 A0A096LPK6 155 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 SMIM23A6NLE4 172 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 EIF3FO00303 357 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 DNAJB5O75953 348 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 HIST1H2AGP0C0S8 130 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 MTHFD2P13995 350 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 HIST1H2ADP20671 130 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 BCL6P41182 706 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 EFNA3P52797 238 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 ARHGAP19Q14CB8 494 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 LINC00303Q3SY05 128 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 MLIPQ5VWP3 458 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 RNF44Q7L0R7 432 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 GPR155Q7Z3F1 870 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 THOC6Q86W42 341 aaKnown RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 PRSS58Q8IYP2 241 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 CYP4X1Q8N118 509 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 ESX1Q8N693 406 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 ENDOVQ8N8Q3 282 aaKnown RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 HIST1H2AHQ96KK5 128 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 GPR78Q96P69 363 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 HIST1H2AJQ99878 128 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 ZPBPQ9BS86 351 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 H2AFJQ9BTM1 129 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 SLC7A5P2Q9GIP4 190 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 DERL2Q9GZP9 239 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 C12orf65Q9H3J6 166 aaKnown RBP11.51□□□□□ -0.57
SCFD1-201ENST00000311943 OARD1Q9Y530 152 aa11.51□□□□□ -0.57
SCFD1-201ENST00000311943 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 SLC16A5O15375 505 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 KDM1AO60341 852 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 EPORP19235 508 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 CD82P27701 267 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 MAT1AQ00266 395 aaKnown RBP11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ABHD18Q0P651 414 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 SP140Q13342 867 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 DNASE1L3Q13609 305 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 BROXQ5VW32 411 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 COX15Q7KZN9 410 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 GPR135Q8IZ08 494 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 CARFQ8N187 725 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 RNF175Q8N4F7 328 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 RAB42Q8N4Z0 105 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ZUFSPQ96AP4 578 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 FBXL8Q96CD0 374 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ATOH8Q96SQ7 321 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ZFYVE21Q9BQ24 234 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 A0A1W2PPM1 405 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 C4orf51C9J302 202 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 K7EM74 188 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ALOX12BO75342 701 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 WDR47O94967 919 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 MSL3P1P0C860 447 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 TYK2P29597 1187 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 PHBP35232 272 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 FRA10AC1Q70Z53 315 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ARHGEF39Q8N4T4 335 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 EXD3Q8N9H8 876 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 ANKRD53Q8N9V6 530 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 DHRS4Q9BTZ2 278 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 B3GNT4Q9C0J1 378 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 AICDAQ9GZX7 198 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 FANCEQ9HB96 536 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 CUTCQ9NTM9 273 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 CTSFQ9UBX1 484 aa11.5□□□□□ -0.57
SCFD1-201ENST00000311943 EXOC1LA0A1B0GW35 172 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 HYKKA2RU49 373 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 TARM1B6A8C7 271 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 JRKO75564 520 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 SIX3O95343 332 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 INHBAP08476 426 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 SBK3P0C264 359 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 CD22P20273 847 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms